Klebsiella pneumoniae PMK1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Klebsiella pneumoniae PMK1 RM systems
Ref: Giess,A.P. unpublished
REBASE ref # 18384
| Sequence length: | GenBank #: | |
| Chromosome: | 5,317,001 bp | CP008929 |
| plasmid pPMK1-B: | 111,693 bp | CP008931 |
| plasmid pPMK1-C: | 69,947 bp | CP008932 |
| plasmid pPMK1-NDM: | 304,526 bp | CP008933 |
REBASE acronym: KpnPMK1
Org_num: 13881
All begin PMK1_, PMK1_b, PMK1_c, PMK1_ndm
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 969 | 190 aa hypothetical protein | |||
| 970 | M | M.Kpnu34ORF4855P (100% identity) | M.KpnPMK1ORF970P | |
| 971 | S | S1.Kpnu34ORF4855P (100% identity) | S.KpnPMK1ORF970P | |
| 972 | R | Kpnu34ORF4855P (100% identity) | KpnPMK1ORF970P | |
| 973 | 615 aa hypothetical protein | |||
| plasmid pPMK1-B | ||||
| 115 | 71 aa hypothetical protein | |||
| 116 | R | KpnRJKP36ORF26595P (100% identity) | KpnPMK1ORF118P | |
| 117 | S | S.KpnRJKP36ORF26595P (100% identity) | S.KpnPMK1ORF118P | |
| 118 | M | M.KpnRJKP36ORF26595P (100% identity) | M.KpnPMK1ORF118P | |
| 1 | 149 aa hypothetical protein | |||
| plasmid pPMK1-C | ||||
| 12 | Transposase | |||
| 13 | R | Rel102253ORF5536P (100% identity) | GACNNNNNNGTC | KpnPMK1ORF15P |
| 14 | S | S.Rel102253ORF5536P (100% identity) | GACNNNNNNGTC | S.KpnPMK1ORF15P |
| 15 | M | M.Rel102253ORF5536P (100% identity) | GACNNNNNNGTC | M.KpnPMK1ORF15P |
| 16 | Tyrosine recombinase XerC | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1262 | Ribulose-phosphate 3-epimerase | |||
| 1263 | M | M.KspC31DamP (100% identity) | GATC | M.KpnPMK1DamP |
| 1264 | cell division protein DamX | |||
| 3518 | 75 aa hypothetical protein | |||
| 3519 | M | M.Kpnst68ORF1125P (100% identity) | GATC | M.KpnPMK1ORF3519P |
| 3520 | Bacteriophage replication | |||
| 4788 | inner membrane transporter YedA | |||
| ??? | V | V.KpnNDM1ORF17390P (100% identity) | V.KpnPMK1ORF4790P | |
| 4790 | M | M.Kpnst69DcmP (100% identity) | CCWGG | M.KpnPMK1ORF4790P |
| 4791 | hydrolase | |||
| plasmid pPMK1-B | ||||
| 107 | 280 aa hypothetical protein | |||
| ??? | M | M.KpnRJKP36ORF26640P (100% identity) | GATC | M.KpnPMK1ORF108P |
| 109 | 77 aa hypothetical protein | |||
| 114 | 192 aa hypothetical protein | |||
| 115 | M | M.Kpn232ORF27700P (8% identity) | M.KpnPMK1ORF115P | |
| 116 | Type I restriction enzyme R protein | |||
| plasmid pPMK1-C | ||||
| 24 | 76 aa hypothetical protein | |||
| ??? | M | M.Kqu56ORFAP (100% identity) | M.KpnPMK1ORF25P | |
| 26 | 73 aa hypothetical protein | |||
| plasmid pPMK1-NDM | ||||
| 111 | 1126 aa hypothetical protein | |||
| 112 | M | M.KpnTCKORFAP (100% identity) | M.KpnPMK1ORF112P | |
| 113 | 250 aa hypothetical protein | |||
| 123 | 117 aa hypothetical protein | |||
| 124 | R | KpnTCKORFBP (100% identity) | CCWGG | KpnPMK1ORF125P |
| 125 | M | M.Kqu645ORF52040P (100% identity) | CCWGG | M.KpnPMK1ORF125P |
| 126 | DNA replication protein DnaC | |||