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Putative Lactobacillus salivarius JCM1046 RM systems
Ref: Raftis,E.J. et al. BMC Genomics 15, 771 (2014)
REBASE ref # 18350
Complete sequence: 1,836,297 bp
GenBank #: CP007646
REBASE acronym: Lsa1046
Org_num: 13821
All begin LSJ_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
168 | Restriction endonuclease S subunits | |||
169 | R | Lsacp400ORF1801P (100% identity) | Lsa1046ORF171P | |
170 | S | S.Lsa258ORF820P (63% identity) | S1.Lsa1046ORF171P | |
171 | M | M.Lsacp400ORF1801P (99% identity) | M.Lsa1046ORF171P | |
172 | S | S.LsaZLp4bORFJP (39% identity) | S2.Lsa1046ORF171P | |
173 | Integrase | |||
174 | S | Type I restriction-modification system, | S3.Lsa1046ORF171P | |
175 | Mobile element protein | |||
935 | Cellobiose PTS, EIIC | |||
936 | S | S.EhiS5ORF6640P (60% identity) | S1.Lsa1046ORF939P | |
937 | Integrase | |||
938 | S | S.SthM368ORF882P (59% identity) | S2.Lsa1046ORF939P | |
939 | M | M.Lsacp400ORF20901P (100% identity) | M.Lsa1046ORF939P | |
940 | R | Lsacp400ORF20901P (100% identity) | Lsa1046ORF939P | |
941 | 78 aa Hypothetical protein | |||
1331 | 171 aa Hypothetical protein | |||
1332 | R | LsaBNS11ORF7670P (75% identity) | Lsa1046ORF1336BP | |
1333 | Transposase ISLasa4k, ISL3 family | |||
1334 | R | LsaGJ24ORF656P (24% identity) | Lsa1046ORF1336AP | |
1335 | S | S.Lsa258ORF7135P (100% identity) | S.Lsa1046ORF1336P | |
1336 | M | M.LsaBNS11ORF7670P (99% identity) | M.Lsa1046ORF1336P | |
1337 | 103 aa Hypothetical protein | |||
1340 | 424 aa Hypothetical protein | |||
1341 | S | S.Lsa006ORF2395P (99% identity) | S.Lsa1046ORF1342P | |
1342 | M | M.LfeB44ORF8195P (99% identity) | M.Lsa1046ORF1342P | |
1343 | R | Lsa006ORF2395P (99% identity) | Lsa1046ORF1342P | |
1344 | 73 aa Hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
471 | Xaa-His dipeptidase | |||
472 | M | M2.LsaBNS11ORF3070P (99% identity) | M.Lsa1046ORF472P | |
??? | RM | Lsacp400ORF4241P (96% identity) | Lsa1046ORF472P | |
475 | RloF | |||
1356 | 180 aa Hypothetical protein | |||
1357 | M | M.Lre84ORFAP (93% identity) | M.Lsa1046ORF1357P | |
1358 | Virulence-related protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
1337 | 103 aa Hypothetical protein | |||
1338 | R | Lsa006MrrP (100% identity) | Lsa1046MrrP | |
1339 | 53 aa Hypothetical protein | |||
1496 | Inosine-5-monophosphate dehydrogenase | |||
1497 | R | Lsacp400ORF16441P (99% identity) | Lsa1046ORF1497P | |
1498 | Protein tyrosine phosphatase |