Treponema putidum OMZ 758 |
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Putative Treponema putidum OMZ 758 RM systems
Ref: Lacap-Bugler,D.C. et al. unpublished
REBASE ref # 18414
Complete sequence: 2,796,913 bp
GenBank #: CP009228
REBASE acronym: Tpu758
Org_num: 13731
All begin JO40_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6660 | pseudogene | |||
| ??? | S | S3.TdeOT2BORF9435P (98% identity) | S.Tpu758ORFAP | |
| 6670 | haloacid dehalogenase | |||
| 6670 | haloacid dehalogenase | |||
| 6675 | R | Tpu835ORF635P (100% identity) | Tpu758ORF6675P | |
| 6685 | sodium:proton antiporter | |||
| 7040 | 155 aa hypothetical protein | |||
| 7045 | R | Tpu847ORF1695P (99% identity) | Tpu758ORF7050P | |
| 7050 | M | M.Tsp791ORF11140P (98% identity) | M.Tpu758ORF7050P | |
| 7055 | cell filamentation protein Fic | |||
| 7060 | type I restriction-modification system | |||
| 7065 | integrase | |||
| 7070 | S | S2.TspB152ORF210P (97% identity) | S1.Tpu758ORF7050P | |
| 7075 | S | S2.Tde852ORF260P (83% identity) | S2.Tpu758ORF7050P | |
| 7080 | 118 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2730 | 3-oxoacyl-ACP synthase | |||
| 2735 | M | M.Tde854ORF90P (96% identity) | ATTAAT | M.Tpu758ORF2735P |
| 2740 | R | Tde854ORF90P (98% identity) | ATTAAT | Tpu758ORF2735P |
| 2745 | trans-2-enoyl-CoA reductase | |||
| 3750 | 70 aa hypothetical protein | |||
| 3755 | V | V.Tpu847ORF11870P (100% identity) | V.Tpu758ORFBP | |
| ??? | M | M.Tpu847ORF11870P (100% identity) | GCSGC | M.Tpu758ORFBP |
| 3765 | R | Tpu847ORF11870P (92% identity) | GCSGC | Tpu758ORFBP |
| 3770 | H | H.Tpu847ORF11870P (100% identity) | H.Tpu758ORFBP | |
| 3780 | 151 aa hypothetical protein | |||
| 6085 | 236 aa hypothetical protein | |||
| 6090 | M | M.Tpu847ORF725P (100% identity) | RAATTY | M.Tpu758ORF6090P |
| 6095 | MFS transporter | |||
| 6915 | 189 aa hypothetical protein | |||
| 6920 | RM | Tpu847ORF1545P (98% identity) | Tpu758ORF6920P | |
| 6925 | membrane protein | |||
| 12100 | ATP-binding protein | |||
| 12105 | M | M.Tpu847ORF6885P (100% identity) | TCTAGA | M.Tpu758ORF12105P |
| 12110 | R | restriction endonuclease | TCTAGA | Tpu758ORF12105P |
| 12120 | translation factor Sua5 | |||
| 12350 | 2-hydroxyacid dehydrogenase | |||
| 12355 | RM | Tpa843ORF2090P (69% identity) | Tpu758ORF12355P | |
| ??? | 297 aa hypothetical protein, partial | |||
| 12355 | 1108 aa hypothetical protein | |||
| ??? | RM | Tde700768ORF8845P (11% identity) | Tpu758ORF12360P | |
| 12365 | invertase | |||
| 12950 | 230 aa hypothetical protein | |||
| 12955 | R | Tpu835ORF6660P (99% identity) | GATC | Tpu758ORF12955P |
| 12960 | phosphoribosylamine--glycine ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7190 | DNA-binding protein | |||
| 7195 | M | M.Tvi802ORF7620P (62% identity) | M.Tpu758ORF7195P | |
| 7200 | R | Tpa843ORF6555P (92% identity) | Tpu758ORF7195P | |
| 7205 | NAD(P)H oxidoreductase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5255 | 259 aa hypothetical protein | |||
| 5260 | R | Tpu847McrBP (64% identity) | Tpu758McrBP | |
| 5265 | R | Tpu835McrC2P (98% identity) | Tpu758McrCP | |
| 5270 | peptidase S9 | |||