Escherichia coli BW25113 K-12 |
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Putative Escherichia coli BW25113 K-12 RM systems
Ref: Grenier,F. et al. unpublished
REBASE ref # 18438
Complete sequence: 4,631,469 bp
GenBank #: CP009273
REBASE acronym: Eco25113
Org_num: 13699
All begin BW25113_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4347 | toxic peptide regulated by antisense sRNA symR | |||
| 4348 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco25113ORF4349P |
| 4349 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco25113ORF4349P |
| 4350 | R | EcoW25113ORF11385P (99% identity) | AACNNNNNNGTGC | Eco25113ORF4349P |
| 4351 | methylated adenine and cytosine restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1959 | amino acid exporter for phenylalanine, | |||
| 1960 | V | V.SflFF64DcmP (100% identity) | V.Eco25113DcmP | |
| 1961 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco25113DcmP |
| 1962 | HD superfamily phosphohydrolase | |||
| 3261 | global DNA-binding transcriptional dual | |||
| 3262 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco25113ORF3262P |
| 3263 | membrane protein | |||
| 3386 | D-ribulose-5-phosphate 3-epimerase | |||
| 3387 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco25113DamP |
| 3388 | cell division protein that binds to the septal | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1158 | e14 prophage; site-specific DNA recombinase | |||
| 1159 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco25113ORF1159P |
| 4519 | isocitrate dehydrogenase, partial | |||
| 4486 | pseudogene | |||
| 4345 | R | SenHNK130McrCP (100% identity) | Eco25113McrCP | |
| 4346 | R | SenHNK130McrBP (100% identity) | Eco25113McrBP | |
| 4347 | toxic peptide regulated by antisense sRNA symR | |||
| 4350 | DEAD/DEAH box helicase | |||
| 4351 | R | SenHNK130MrrP (100% identity) | Eco25113MrrP | |
| 4352 | GTP-binding protein, putative GTPase | |||