Thiomonas species CB2 |
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Putative Thiomonas species CB2 RM systems
Ref: Plewniak,Frederic. unpublished
REBASE ref # 18171
| Sequence length: | GenBank #: | |
| Chromosome: | 17,531 bp | LK931594 |
| Chromosome: | 22,593 bp | LK931655 |
| Chromosome: | 7,414 bp | LK931664 |
| Chromosome: | 7,125 bp | LK931593 |
| Chromosome: | 209,760 bp | LK931651 |
| Chromosome: | 79,957 bp | LK931618 |
| Chromosome: | 10,640 bp | LK931663 |
| Chromosome: | 62,376 bp | LK931640 |
| Chromosome: | 34,476 bp | LK931660 |
| Chromosome: | 21,460 bp | LK931638 |
| chromosome CB2: | 3,866,172 bp | LR131956 |
REBASE acronym: TspCB2
Org_num: 13654
All begin CB2_, THICB2_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 840010 | peptidase family M4 | |||
| 840011 | M | M.TspOC7ORF30888P (100% identity) | M.TspCB2ORF840011P | |
| Chromosome | ||||
| 850001 | S | S.Rsp17029ORF1857P (11% identity) | S.TspCB2ORF850001P | |
| 850002 | 379 aa conserved hypothetical protein | |||
| 850003 | R | TspOC7ORF30901P (100% identity) | TspCB2ORF850001P | |
| 850004 | 262 aa conserved hypothetical protein | |||
| chromosome CB2 | ||||
| 20449 | conserved protein of unknown function | |||
| 20450 | R | TspOC7ORF30901P (100% identity) | TspCB2ORF850001P | |
| 20451 | conserved protein of unknown function | |||
| 20452 | S | S.Rsp17029ORF1857P (11% identity) | S.TspCB2ORF850001P | |
| 20453 | transposase (fragment) | |||
| 60330 | peptidase family M4 | |||
| 60331 | M | M.TspOC7ORF30888P (100% identity) | M.TspCB2ORF840011P | |
| 60333 | conserved protein of unknown function | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 770010 | exported hypothetical protein | |||
| 770011 | M | M.TspOC7ORF31459P (90% identity) | M.TspCB2ORF770011P | |
| 770012 | 356 aa hypothetical protein | |||
| Chromosome | ||||
| 730002 | Type IV secretory pathway, protease | |||
| 730003 | RM | TspOC7ORF31810P (100% identity) | TspCB2ORF730003P | |
| 730004 | Integration host factor subunit beta | |||
| Chromosome | ||||
| 630027 | 102 aa conserved hypothetical protein | |||
| 630028 | RM | TspOC7ORF10625P (99% identity) | TspCB2ORF630028P | |
| 630029 | 284 aa conserved hypothetical protein | |||
| Chromosome | ||||
| 810023 | TraB family protein | |||
| 810025 | RM | TspOC7ORF31371P (100% identity) | TspCB2ORF810025P | |
| 810026 | Transcriptional regulator, AbrB family | |||
| Chromosome | ||||
| 610021 | Integration host factor (IHF) | |||
| 610022 | RM | TspOC7ORF10664P (66% identity) | TspCB2ORF610022P | |
| chromosome CB2 | ||||
| 10002 | Type IV secretory pathway, protease | |||
| 10003 | RM | TspOC7ORF31810P (100% identity) | TspCB2ORF730003P | |
| 10004 | Integration host factor subunit beta | |||
| 10351 | protein of unknown function | |||
| 10353 | M | M.TspOC7ORF31459P (90% identity) | M.TspCB2ORF770011P | |
| 10354 | protein of unknown function | |||
| 10439 | TraB family protein | |||
| 10441 | RM | TspOC7ORF31371P (100% identity) | TspCB2ORF810025P | |
| 10442 | Transcriptional regulator, AbrB family | |||
| 110021 | Integration host factor (IHF) | |||
| 110022 | RM | Tsp17B3ORF10669P (100% identity) | TspCB2ORF110022P | |
| 110023 | lipoprotein pcp or SlyB | |||
| 110060 | conserved protein of unknown function | |||
| 110061 | RM | TspOC7ORF10625P (100% identity) | TspCB2ORF110061P | |
| 110062 | conserved protein of unknown function | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 200009 | 211 aa conserved hypothetical protein | |||
| 200010 | R | TspOC7ORF30516BP (95% identity) | TspCB2ORF200010P | |
| Chromosome | ||||
| 210002 | M | M.TspOC7ORF30516P (100% identity) | M.TspCB2ORF210002P | |
| 210003 | phage-associated protein | |||
| chromosome CB2 | ||||
| 60340 | conserved protein of unknown function | |||
| 60341 | R | TspOC7ORF30516BP (100% identity) | TspCB2ORF210002BP | |
| 60342 | transposase | |||
| 60343 | R | TspOC7ORF30516AP (100% identity) | TspCB2ORF210002AP | |
| 60344 | M | M.TspOC7ORF30516P (100% identity) | M.TspCB2ORF210002P | |
| 60345 | phage-associated protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 430016 | 3-deoxy-D-arabino-heptulosonate-7-phosphate | |||
| 430017 | R | Tsp16B3MrrP (100% identity) | TspCB2MrrP | |
| 430018 | aspartyl-tRNA synthetase | |||
| chromosome CB2 | ||||
| 60982 | transposase (fragment) | |||
| 60983 | R | TspOC7McrCP (100% identity) | TspCB2McrCP | |
| 60984 | R | TspOC7McrBP (100% identity) | TspCB2McrBP | |
| 60985 | conserved protein of unknown function | |||