Klebsiella pneumoniae blaNDM-1 |
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Putative Klebsiella pneumoniae blaNDM-1 RM systems
Ref: Segre,J. unpublished
REBASE ref # 18072
| Sequence length: | GenBank #: | |
| Chromosome: | 5,297,511 bp | CP009114 |
| plasmid plasmid1: | 94,760 bp | CP009116 |
| plasmid plasmid2: | 118,061 bp | CP009115 |
REBASE acronym: KpnNDM1
Org_num: 11926
All begin FH42_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19885 | type III restriction protein res subunit | |||
| ??? | S | S.Kpss50ORF23655P (100% identity) | CAAYNNNNNGTRC | S.KpnNDM1II |
| 19895 | M | M.Kpss50ORF23655P (100% identity) | CAAYNNNNNGTRC | M.KpnNDM1II |
| 19900 | R | Kpss50ORF23655P (100% identity) | CAAYNNNNNGTRC | KpnNDM1IIP |
| 19905 | 199 aa hypothetical protein | |||
| plasmid plasmid2 | ||||
| 26370 | 71 aa hypothetical protein | |||
| 26375 | M | M.Sen42919ORF11180P (100% identity) | CAGNNNNNNCGT | M.KpnNDM1I |
| 26380 | S | S.Sen42919ORF11180P (100% identity) | CAGNNNNNNCGT | S.KpnNDM1I |
| 26385 | R | Sen42919ORF11180P (100% identity) | CAGNNNNNNCGT | KpnNDM1IP |
| 26390 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2345 | integrase | |||
| 2350 | M | M.Ksp1927ORF14405P (100% identity) | GATC | M.KpnNDM1ORF2350P |
| 2355 | regulator | |||
| 8220 | multidrug DMT transporter | |||
| 8225 | V | V.Ksp54798DcmP (100% identity) | V.KpnNDM1ORF8230P | |
| ??? | M | M.KspC31ORFBP (100% identity) | CCWGG | M.KpnNDM1ORF8230P |
| 8235 | hydrolase | |||
| 15115 | ribulose-phosphate 3-epimerase | |||
| 15120 | M | M.KspC31DamP (100% identity) | GATC | M.KpnNDM1DamP |
| 15125 | cell division protein DamX | |||
| 25485 | 100 aa hypothetical protein | |||
| 25490 | M | M.KpnTGH8ORF18000P (99% identity) | GATC | M.KpnNDM1ORF25490P |
| 25495 | endonuclease | |||
| plasmid plasmid1 | ||||
| 26750 | transposase | |||
| 26755 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.KpnNDM1ORF25685P |
| 26760 | R | YpsR1ORFAP (99% identity) | CCWGG | KpnNDM1ORF25685P |
| 26765 | transposase | |||
| plasmid plasmid2 | ||||
| 26310 | 73 aa hypothetical protein | |||
| 26315 | M | M.SmaQC11ORF52800P (100% identity) | M.KpnNDM1ORF26315P | |
| 26320 | 76 aa hypothetical protein | |||