Salmonella enterica subsp. enterica serovar Typhimurium ATCC 13311 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium ATCC 13311 RM systems
Ref: Terabayashi,Y. et al. unpublished
REBASE ref # 18492
Complete sequence: 4,793,299 bp
GenBank #: CP009102
REBASE acronym: Sen13311
Org_num: 13506
All begin IZ85_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22635 | endoribonuclease SymE | |||
| 22640 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen13311II |
| 22645 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen13311II |
| 22650 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen13311IIP |
| 22655 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9740 | multidrug DMT transporter | |||
| 9745 | V | very short patch repair endonuclease | CCWGG | V.Sen13311DcmPP |
| 9750 | DNA cytosine methylase | |||
| 9745 | very short patch repair endonuclease | |||
| 9750 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen13311Dcm |
| 9755 | hydrolase | |||
| 9970 | crossover junction endodeoxyribonuclease | |||
| 9975 | M | M.Sty13348ORF110P (100% identity) | GATC | M.Sen13311ORFBP |
| 9980 | 160 aa hypothetical protein | |||
| 13235 | crossover junction endodeoxyribonuclease | |||
| 13240 | M | M.Sty13348ORF110P (100% identity) | GATC | M.Sen13311ORFAP |
| 13245 | 160 aa hypothetical protein | |||
| 16895 | Fis family transcriptional regulator | |||
| 16900 | M | methyltransferase | ATGCAT | M.Sen13311IV |
| 16905 | membrane protein | |||
| 17385 | ribulose-phosphate 3-epimerase | |||
| 17390 | M | M.StyTDamP (100% identity) | M.Sen13311DamP | |
| 17395 | cell division protein DamX | |||
| 22490 | spermidine/putrescine ABC transporter ATPase | |||
| 22495 | RM | StyUK1IV (100% identity) | GATCAG | Sen13311III |
| 22500 | DNA repair protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1645 | sugar transporter | |||
| 1650 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen13311I |
| 1655 | R | StyUK1IP (99% identity) | CAGAG | Sen13311IP |
| 1660 | cytochrome D ubiquinol oxidase subunit I | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22650 | DEAD/DEAH box helicase | |||
| 22655 | R | Sen74MrrP (100% identity) | Sen13311MrrP | |
| 22660 | membrane protein | |||