Desulfonatronum thiodismutans MLF-1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Desulfonatronum thiodismutans MLF-1 RM systems
Ref: Lefevre,C.T. et al. unpublished
REBASE ref # 17900
| Sequence length: | GenBank #: | |
| Chromosome: | 3,923,922 bp | CP008803 |
| Chromosome: | 3,923,654 bp | JPIK00000000 (NZ_JPIK00000000) |
REBASE acronym: DthMLF1
Org_num: 13384
All begin GY33_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 735 | 114 aa hypothetical protein | |||
| 740 | R | Ath19377ORFFP (84% identity) | DthMLF1ORF775P | |
| 745 | toxin Fic | |||
| ??? | S | S.SspW1107ORF1721P (55% identity) | S.DthMLF1ORF775P | |
| 765 | 142 aa hypothetical protein | |||
| 775 | M | M.AspSHORF6345P (89% identity) | M.DthMLF1ORF775P | |
| 780 | thymidylate kinase | |||
| 2235 | isoleucine--tRNA ligase | |||
| 2250 | R | MgrR3S1ORF36110P (76% identity) | DthMLF1ORF2260P | |
| ??? | S | S.Fsp911ORF7485P (49% identity) | S.DthMLF1ORF2260P | |
| 2260 | M | M.DspX2ORF2162P (86% identity) | M.DthMLF1ORF2260P | |
| 2265 | DNA-binding protein | |||
| 6290 | 132 aa hypothetical protein | |||
| 6300 | M | M.DolHORF2236P (81% identity) | M.DthMLF1ORF6300P | |
| ??? | S | S.Csp4102ORF15160P (43% identity) | S.DthMLF1ORF6300P | |
| ??? | R | DolHORF2236P (64% identity) | DthMLF1ORF6300P | |
| 6320 | 218 aa hypothetical protein | |||
| 6545 | 539 aa hypothetical protein | |||
| ??? | S | S.DspZS1ORF14805P (53% identity) | S.DthMLF1ORF6555P | |
| 6555 | M | M.DspZS1ORF14805P (89% identity) | M.DthMLF1ORF6555P | |
| 6560 | R | DspZS1ORF14805P (94% identity) | DthMLF1ORF6555P | |
| 6565 | 66 aa hypothetical protein | |||
| 7800 | 69 aa hypothetical protein | |||
| 7805 | R | Rma10ORF5050P (83% identity) | DthMLF1ORF7825P | |
| 7810 | S | S.SpsTT3774ORF7730P (35% identity) | S.DthMLF1ORF7825P | |
| 7815 | 91 aa hypothetical protein | |||
| 7820 | GCN5 family acetyltransferase | |||
| 7825 | M | M.Gha49870ORF350P (87% identity) | M.DthMLF1ORF7825P | |
| 7835 | SOS mutagenesis and repair protein UmuC | |||
| 16210 | 127 aa hypothetical protein | |||
| 16225 | M | M.AehMLHE1ORF1792P (89% identity) | M.DthMLF1ORF16225P | |
| ??? | S | S.XspJY1ORF2925P (43% identity) | S.DthMLF1ORF16225P | |
| ??? | R | AehMLHE1ORF1792P (86% identity) | DthMLF1ORF16225P | |
| Chromosome | ||||
| ??? | M | M.AehMLHE1ORF1792P (89% identity) | M.DthMLF1ORF16225P | |
| ??? | S | S.XspJY1ORF2925P (43% identity) | S.DthMLF1ORF16225P | |
| ??? | R | AehMLHE1ORF1792P (86% identity) | DthMLF1ORF16225P | |
| ??? | S | S.DspZS1ORF14805P (53% identity) | S.DthMLF1ORF6555P | |
| ??? | M | M.DspZS1ORF14805P (89% identity) | M.DthMLF1ORF6555P | |
| ??? | R | DspZS1ORF14805P (94% identity) | DthMLF1ORF6555P | |
| ??? | R | Rma10ORF5050P (83% identity) | DthMLF1ORF7825P | |
| ??? | S | S.SpsTT3774ORF7730P (35% identity) | S.DthMLF1ORF7825P | |
| ??? | M | M.Gha49870ORF350P (87% identity) | M.DthMLF1ORF7825P | |
| ??? | R | Ath19377ORFFP (84% identity) | DthMLF1ORF775P | |
| ??? | S | S.SspW1107ORF1721P (55% identity) | S.DthMLF1ORF775P | |
| ??? | M | M.AspSHORF6345P (89% identity) | M.DthMLF1ORF775P | |
| ??? | M | M.DolHORF2236P (81% identity) | M.DthMLF1ORF6300P | |
| ??? | S | S.Csp4102ORF15160P (43% identity) | S.DthMLF1ORF6300P | |
| ??? | R | DolHORF2236P (64% identity) | DthMLF1ORF6300P | |
| ??? | R | MgrR3S1ORF36110P (76% identity) | DthMLF1ORF2260P | |
| ??? | S | S.Fsp911ORF7485P (49% identity) | S.DthMLF1ORF2260P | |
| ??? | M | M.DspX2ORF2162P (86% identity) | M.DthMLF1ORF2260P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2865 | 357 aa hypothetical protein | |||
| 2870 | R | Bag3016ORF27225P (50% identity) | GGCGCC | DthMLF1ORFAP |
| ??? | M | M.Hhy1100ORF6153P (54% identity) | GGCGCC | M.DthMLF1ORFAP |
| 2885 | XRE family transcriptional regulator | |||
| 2930 | DNA-binding protein | |||
| ??? | M | M.Dla10312ORFCP (85% identity) | CCCGGG | M.DthMLF1ORFBP |
| 2940 | LysR family transcriptional regulator | |||
| 3085 | ornithine acetyltransferase | |||
| 3090 | R | Dve17965ORFHP (67% identity) | CTGCAG | DthMLF1ORF3095P |
| 3095 | M | M.Dba7044I (54% identity) | CTGCAG | M.DthMLF1ORF3095P |
| 3105 | prolipoprotein diacylglyceryl transferase | |||
| 8795 | 60 aa hypothetical protein | |||
| 8800 | RM | PbaPla175ORF1990P (60% identity) | DthMLF1ORF8800P | |
| 8815 | 136 aa hypothetical protein | |||
| 15660 | 374 aa hypothetical protein | |||
| 15665 | V | V.Mme286ORFK1P (58% identity) | V.DthMLF1ORF15670P | |
| 15670 | M | M.NspENR4ORF2046P (70% identity) | CCGCGG | M.DthMLF1ORF15670P |
| 15680 | 93 aa hypothetical protein | |||
| Chromosome | ||||
| ??? | V | V.Mme286ORFK1P (58% identity) | V.DthMLF1ORF15670P | |
| ??? | M | M.NspENR4ORF2046P (70% identity) | CCGCGG | M.DthMLF1ORF15670P |
| ??? | R | SchL1ORF1987P (27% identity) | CCGCGG | DthMLF1ORF15670P |
| ??? | RM | PbaPla175ORF1990P (60% identity) | DthMLF1ORF8800P | |
| ??? | R | Bag3016ORF27225P (50% identity) | GGCGCC | DthMLF1ORFAP |
| ??? | M | M.Hhy1100ORF6153P (54% identity) | GGCGCC | M.DthMLF1ORFAP |
| ??? | M | M.Dla10312ORFCP (85% identity) | CCCGGG | M.DthMLF1ORFBP |
| ??? | R | Dve17965ORFHP (67% identity) | CTGCAG | DthMLF1ORF3095P |
| ??? | M | M.Dba7044I (54% identity) | CTGCAG | M.DthMLF1ORF3095P |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7985 | transcriptional regulator | |||
| ??? | R | Cta13490MrrP (50% identity) | DthMLF1Mrr2P | |
| 7995 | 168 aa hypothetical protein | |||
| 10025 | transcriptional regulator | |||
| 10035 | R | GmeMrrP (42% identity) | DthMLF1MrrP | |
| 10040 | 294 aa hypothetical protein | |||
| 10070 | pseudogene | |||
| ??? | R | R1.DthMLF1McrBP (100% identity) | DthMLF1McrBP | |
| 10085 | R | R2.DthMLF1McrBP (100% identity) | DthMLF1McrCP | |
| 10095 | 204 aa hypothetical protein | |||
| Chromosome | ||||
| ??? | R | DthMLF1McrBP (100% identity) | R1.DthMLF1McrBP | |
| ??? | R | DthMLF1McrCP (100% identity) | R2.DthMLF1McrBP | |
| ??? | R | Cta13490MrrP (50% identity) | DthMLF1Mrr2P | |
| ??? | R | GmeMrrP (42% identity) | DthMLF1MrrP | |