Peptoclostridium difficile 7032994 |
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Putative Peptoclostridium difficile 7032994 RM systems
Ref: Monot,Marc. unpublished
REBASE ref # 17896
| Sequence length: | GenBank #: | |
| Chromosome: | 432,595 bp | LK932411 |
| Chromosome: | 158,441 bp | LK932360 |
| Chromosome: | 81,366 bp | LK932410 |
| Chromosome: | 106,988 bp | LK932419 |
| Chromosome: | 1,410 bp | LK932373 |
| Chromosome: | 40,621 bp | LK932406 |
REBASE acronym: Pdi6602
Org_num: 13381
All begin BN1097_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 710235 | 687 aa conserved hypothetical protein | |||
| 710236 | R | Pdi6601ORF700242P (100% identity) | GCAYNNNNNNTTC | Pdi6602ORF710241P |
| 710237 | 142 aa conserved hypothetical protein | |||
| 710238 | Nucleotidyltransferase domain protein | |||
| 710239 | 102 aa conserved hypothetical protein | |||
| 710240 | S | S.Pdi6601ORF700242P (100% identity) | GCAYNNNNNNTTC | S.Pdi6602ORF710241P |
| 710241 | M | M.Pdi6601ORF700242P (100% identity) | GCAYNNNNNNTTC | M.Pdi6602ORF710241P |
| 710242 | D-tagatose-1,6-bisphosphate aldolase subunit | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 710332 | Sortase, SrtB family | |||
| 710333 | M | M.Pdi6601ORF700335P (100% identity) | GCNGC | M.Pdi6602ORF710333P |
| 710334 | 872 aa conserved hypothetical protein | |||
| Chromosome | ||||
| 250004 | 274 aa hypothetical protein | |||
| 250005 | M | M.Pdi6601ORF620005P (100% identity) | CTSAG | M.Pdi6602ORF250005P |
| 250006 | two-component response regulator YvrH involved | |||
| Chromosome | ||||
| 700038 | Phospholipase, patatin family | |||
| 700039 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Pdi6602ORF700039P |
| 700040 | Transcriptional regulator, Rrf2 family | |||
| Chromosome | ||||
| 790078 | 112 aa conserved hypothetical protein | |||
| 790079 | R | Pdi6601ORF790080P (100% identity) | GATC | Pdi6602ORF790080P |
| 790080 | M | M.Pdi6601ORF790080P (100% identity) | GATC | M.Pdi6602ORF790080P |
| 790081 | 63 aa hypothetical protein | |||
| Chromosome | ||||
| 370002 | 111 aa conserved hypothetical protein | |||
| ??? | M | M.PdiZ31ORF1645P (61% identity) | M.Pdi6602ORFAP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 710234 | membrane protein | |||
| 710235 | R | Pdi6601GmrSDP (100% identity) | Pdi6602GmrSDP | |
| 710236 | Helicase protein | |||
| Chromosome | ||||
| 670009 | Sigma-54 interaction domain protein | |||
| 670010 | R | Pdi6601McrCP (100% identity) | Pdi6602McrCP | |
| 670011 | R | Pdi6601McrBP (100% identity) | Pdi6602McrBP | |
| 670012 | 240 aa conserved hypothetical protein | |||