Klebsiella pneumoniae subsp. pneumoniae KPNIH1 |
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Putative Klebsiella pneumoniae subsp. pneumoniae KPNIH1 RM systems
Ref: Snitkin,E.S. et al. Sci Transl Med 4 (148), 148RA116 (2012)
REBASE ref # 17709
| Sequence length: | GenBank #: | |
| Chromosome: | 5,394,056 bp | CP008827 |
| plasmid pKPN-498: | 243,824 bp | CP008829 |
| plasmid pKpQIL-6e6: | 113,639 bp | CP008830 |
REBASE acronym: KpnNIH1
Org_num: 13376
All begin KPNIH1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pKpQIL-6e6 | ||||
| 28060 | transposase | |||
| 28065 | R | Sen42919ORF11180P (100% identity) | CAGNNNNNNCGT | KpnNIH1IP |
| 28070 | S | S.Sen42919ORF11180P (100% identity) | CAGNNNNNNCGT | S.KpnNIH1I |
| 28075 | M | M.Sen42919ORF11180P (100% identity) | CAGNNNNNNCGT | M.KpnNIH1I |
| 28080 | 71 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6185 | 255 aa hypothetical protein | |||
| 6190 | M | M.Kpss50ORF20150P (100% identity) | GATC | M.KpnNIH1ORF6190P |
| 6195 | exonuclease | |||
| 8635 | 75 aa hypothetical protein | |||
| 8640 | M | M.Ksp1927ORF17200P (100% identity) | GATC | M.KpnNIH1ORF8640P |
| 8645 | endonuclease | |||
| 10885 | integrase | |||
| 10890 | M | M.Ksp1927ORF14405P (100% identity) | GATC | M.KpnNIH1ORF10890P |
| 10895 | regulator | |||
| 16905 | multidrug DMT transporter | |||
| 16910 | V | V.KspC31DcmP (75% identity) | CCWGG | V.KpnNIH1DcmP |
| 16915 | M | M.KpnshvKP1DcmP (100% identity) | CCWGG | M.KpnNIH1Dcm |
| 16920 | hydrolase | |||
| 19315 | phage protein | |||
| 19320 | M | M.Kpni512ORF1337P (100% identity) | GATC | M.KpnNIH1ORF27220P |
| 19325 | 60 aa hypothetical protein | |||
| 20050 | endonuclease | |||
| 20055 | M | M.Ksp1927ORF4530P (100% identity) | GATC | M.KpnNIH1ORF20055P |
| 20060 | 75 aa hypothetical protein | |||
| 24440 | ribulose-phosphate 3-epimerase | |||
| 24445 | M | M.KspC31DamP (100% identity) | GATC | M.KpnNIH1DamP |
| 24450 | cell division protein DamX | |||
| plasmid pKPN-498 | ||||
| 27215 | 60 aa hypothetical protein | |||
| 27220 | M | M.Kpni512ORF1337P (100% identity) | GATC | M.KpnNIH1ORF27220P |
| 27225 | phage protein | |||
| plasmid pKpQIL-6e6 | ||||
| 28125 | 76 aa hypothetical protein | |||
| ??? | M | M.Kqu56ORFAP (100% identity) | M.KpnNIH1ORF28130P | |
| 28135 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17040 | SpnT protein | |||
| 17045 | M | M.Kpni512ORF1793P (100% identity) | CGCATC | M.KpnNIH1II |
| 17050 | R | Kpni512ORF1793P (100% identity) | CGCATC | KpnNIH1IIP |
| 17055 | type IV pilin | |||