Salmonella enterica subsp. enterica serovar Dublin |
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Putative Salmonella enterica subsp. enterica serovar Dublin RM systems
Ref: Aslett,A.Martin. and De Silva,Nishadi. unpublished
REBASE ref # 17882
Complete sequence: 4,814,038 bp
GenBank #: LK931502
REBASE acronym: SenOU1113
Org_num: 4155
All begin SDSC_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 46621 | 306 aa conserved hypothetical protein | |||
| 46631 | R | Ssp3CORF11555P (100% identity) | GGYANNNNNNTCG | SenOU1113ORF46651P |
| ??? | S | S1.Ssp3CORF11555P (100% identity) | GGYANNNNNNTCG | S.SenOU1113ORF46651P |
| 46651 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.SenOU1113ORF46651P |
| 46661 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8221 | ead/Ea22-like family protein | |||
| 8231 | M | M.Ssp3CORF17125P (100% identity) | M.SenOU1113ORF8231P | |
| 8241 | DUF550 domain-containing protein | |||
| 9951 | 231 aa conserved hypothetical protein | |||
| 9961 | M | M.Ssp3CDcmP (100% identity) | CCWGG | M.SenOU1113DcmP |
| 9971 | V | V.StyUK1DcmP (100% identity) | V.SenOU1113DcmP | |
| 9981 | membrane protein | |||
| 20461 | crossover junction endodeoxyribonuclease rusa | |||
| 20471 | M | M.Ssp3CORF22825P (100% identity) | GATC | M.SenOU1113ORF20471P |
| 20481 | phage protein | |||
| 20621 | 245 aa hypothetical protein | |||
| 20631 | M | M.Ssp3CORF22905P (91% identity) | M.SenOU1113ORF20631P | |
| 20641 | 249 aa hypothetical protein | |||
| 28231 | phage tail tape measure protein | |||
| 28241 | M | M.Ssp8103ORF5415P (100% identity) | GATC | M.SenOU1113ORF28241P |
| 28251 | Dam family site-specific DNA--methyltransferase | |||
| 34971 | Fis DNA-binding protein | |||
| 34981 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenOU1113ORF34981P |
| 34991 | exported protein | |||
| 36001 | ribulose-phosphate 3-epimerase | |||
| 36011 | M | M.StyTDamP (100% identity) | GATC | M.SenOU1113DamP |
| 36021 | DamX protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1211 | metabolite transport protein | |||
| 1221 | M | M.StyUK1I (100% identity) | CAGAG | M.SenOU1113ORF1221P |
| 1231 | R | SenSDORF379P (100% identity) | CAGAG | SenOU1113ORF1221P |
| 1251 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 46651 | Type I restriction-modification system | |||
| 46661 | R | SenC618MrrP (74% identity) | SenOU1113Mrr4P | |
| 46701 | Type I restriction-modification | |||