Salmonella enterica subsp. enterica serovar Typhimurium VNP20009 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium VNP20009 RM systems
Ref: Broadway,K.M. et al. unpublished
REBASE ref # 17794
| Sequence length: | GenBank #: | |
| Chromosome: | 4,763,557 bp | CP007804 |
| plasmid pSLT_VNP20009: | 93,833 bp | CP008745 |
REBASE acronym: Sen20009
Org_num: 13224
All begin DC51_, DC51_p
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4652 | 110 aa hypothetical protein | |||
| ??? | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen20009ORF4654P |
| 4654 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen20009ORF4654P |
| 4655 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen20009ORF4654P |
| 4656 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1154 | Phage EaD protein | |||
| 1155 | M | M.Sens29958ORF6205P (100% identity) | M.Sen20009ORF1155P | |
| 1156 | Phage EaA protein | |||
| 1998 | Permease of the drug | |||
| 1999 | V | V.StyUK1DcmP (100% identity) | V.Sen20009DcmP | |
| 2000 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen20009DcmP |
| 2001 | metal-dependent phosphohydrolase | |||
| 2047 | Phage-related protein | |||
| 2048 | M | M.StyUK1V (96% identity) | GATC | M.Sen20009ORF2048P |
| 2049 | Primosomal protein I | |||
| 3480 | DNA-binding protein Fis | |||
| 3481 | M | Adenine-specific methyltransferase | ATGCAT | M.Sen20009ORF3481P |
| 3482 | periplasmic protein | |||
| 3578 | Ribulose-phosphate 3-epimerase | |||
| 3579 | M | Methyl-directed repair DNA adenine methylase | GATC | M.Sen20009DamP |
| 3580 | DamX | |||
| 4615 | ABC-type sugar | |||
| 4616 | RM | StyUK1IV (100% identity) | GATCAG | Sen20009ORF4616P |
| 4617 | ATPase-like protein | |||
| plasmid pSLT_VNP20009 | ||||
| 81 | 63 aa hypothetical protein | |||
| 82 | M | M.StyUK1ORFAP (100% identity) | M.Sen20009ORF82P | |
| 83 | cytoplasmic protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 375 | metabolite transport protein | |||
| 376 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen20009ORF376P |
| 377 | R | StyUK1IP (100% identity) | CAGAG | Sen20009ORF376P |
| 378 | 44 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4655 | Type I restriction-modification system | |||
| 4656 | R | StyUK1MrrP (100% identity) | Sen20009MrrP | |
| 4657 | 95 aa hypothetical protein | |||