Klebsiella pneumoniae subsp. pneumoniae KPNIH10 |
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Putative Klebsiella pneumoniae subsp. pneumoniae KPNIH10 RM systems
Ref: Snitkin,E.S. et al. Sci Transl Med 4 (148), 148RA116 (2012)
REBASE ref # 17709
| Sequence length: | GenBank #: | |
| Chromosome: | 5,395,263 bp | CP007727 |
| plasmid pKPN-498: | 243,824 bp | CP007729 |
| plasmid pKpQIL-6e6: | 113,639 bp | CP007730 |
REBASE acronym: KpnNIH10
Org_num: 13000
All begin KPNIH10_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pKpQIL-6e6 | ||||
| 28045 | transposase | |||
| 28050 | R | Sen42919ORF11180P (100% identity) | CAGNNNNNNCGT | KpnNIH10IP |
| 28055 | S | S.Sen42919ORF11180P (100% identity) | CAGNNNNNNCGT | S.KpnNIH10I |
| 28060 | M | M.Sen42919ORF11180P (100% identity) | CAGNNNNNNCGT | M.KpnNIH10I |
| 28065 | 71 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6175 | 255 aa hypothetical protein | |||
| 6180 | M | M.Kpss50ORF20150P (100% identity) | GATC | M.KpnNIH10ORF6180P |
| 6185 | exonuclease | |||
| 8635 | 75 aa hypothetical protein | |||
| 8640 | M | M.Ksp1927ORF17200P (100% identity) | GATC | M.KpnNIH10ORF8640P |
| 8645 | endonuclease | |||
| 10880 | integrase | |||
| 10885 | M | M.Ksp1927ORF14405P (100% identity) | GATC | M.KpnNIH10ORF10885P |
| 10890 | regulator | |||
| 16900 | multidrug DMT transporter | |||
| 16905 | V | V.KspC31DcmP (75% identity) | CCWGG | V.KpnNIH10DcmP |
| ??? | M | dcm | CCWGG | M.KpnNIH10Dcm |
| 16915 | hydrolase | |||
| 19320 | phage protein | |||
| 19325 | M | M.Kpni512ORF1337P (100% identity) | GATC | M.KpnNIH10ORF19325P |
| 19330 | 60 aa hypothetical protein | |||
| 20055 | endonuclease | |||
| 20060 | M | M.Ksp1927ORF4530P (100% identity) | GATC | M.KpnNIH10ORF20060P |
| 20065 | 75 aa hypothetical protein | |||
| 24435 | ribulose-phosphate 3-epimerase | |||
| 24440 | M | M.KspC31DamP (100% identity) | GATC | M.KpnNIH10DamP |
| 24445 | cell division protein DamX | |||
| plasmid pKPN-498 | ||||
| 27210 | 60 aa hypothetical protein | |||
| 27215 | M | M.Kpni512ORF1337P (100% identity) | GATC | M.KpnNIH10ORF19325P |
| 27220 | phage protein | |||
| 27210 | 60 aa hypothetical protein | |||
| 27215 | M | M.Kpni512ORF1337P (100% identity) | GATC | M.KpnNIH10ORF27215P |
| 27220 | phage protein | |||
| plasmid pKpQIL-6e6 | ||||
| 28115 | 76 aa hypothetical protein | |||
| ??? | M | M.Kqu56ORFAP (100% identity) | M.KpnNIH10ORF28120P | |
| 28125 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17035 | SpnT protein | |||
| 17040 | M | M.Kpni512ORF1793P (100% identity) | CGCATC | M.KpnNIH10II |
| 17045 | R | Kpni512ORF1793P (100% identity) | CGCATC | KpnNIH10IIP |
| 17050 | type IV pilin | |||