Serpentinomonas raichei A1 |
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Putative Serpentinomonas raichei A1 RM systems
Ref: Suzuki,S. et al. Nat Commun (2014) In press
REBASE ref # 17593
Complete sequence: 2,574,013 bp
GenBank #: AP014568
REBASE acronym: SraA1
Org_num: 12930
All begin SRAA_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1142 | uncharacterized flavoprotein | |||
| 1143 | M | M.SspFB5ORF29510P (76% identity) | M.SraA1ORF1143P | |
| 1144 | S | S.WocXK5ORF6040P (48% identity) | S.SraA1ORF1143P | |
| 1145 | uncharacterized conserved protein | |||
| 1146 | R | Csp023ORF610P (70% identity) | SraA1ORF1143P | |
| 1147 | predicted metal-dependent hydrolase | |||
| 1440 | GTPase subunit of restriction endonuclease | |||
| 1441 | R | Pspc21ORF14115P (98% identity) | GCCNNNNNGTCC | SraA1ORF1441P |
| 1442 | S | S.PchAW1ORF22475P (96% identity) | GCCNNNNNGTCC | S.SraA1ORF1441P |
| 1443 | superfamily I DNA and RNA helicase | |||
| 1444 | predicted ATP-dependent endonuclease of the OLD | |||
| 1445 | M | M2.AspJSORF3609P (95% identity) | GCCNNNNNGTCC | M2.SraA1ORF1441P |
| 1446 | transposase and inactivated derivatives | |||
| 1447 | M | M1.Pst55ORF20210P (87% identity) | GCCNNNNNGTCC | M1.SraA1ORF1441P |
| 1448 | predicted Rossmann fold nucleotide-binding | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1101 | uroporphyrinogen-III methylase | |||
| 1102 | RM | RfeDORF4327P (69% identity) | SraA1ORF1102P | |
| 1103 | plasmid stabilization system protein | |||
| 1188 | Mu-like prophage protein gpG | |||
| 1189 | M | M.Axy984ORF31915P (14% identity) | M.SraA1ORF1189P | |
| 1190 | D-alanyl-D-alanine carboxypeptidase | |||
| 1231 | lactoylglutathione lyase and related lyase | |||
| 1232 | M | M.RsoRSCMORF3290P (64% identity) | CCWGG | M.SraA1ORF1232P |
| 1233 | seryl-tRNA synthetase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1173 | histone acetyltransferase HPA2 and related | |||
| 1174 | M | M.Nsp79ORF8P (67% identity) | M.SraA1ORF1174P | |
| 1175 | virulence protein | |||
| 1176 | R | DspR20IP (91% identity) | SraA1ORF1174P | |
| 1177 | Fe-S cluster protector protein | |||
| 2076 | permease of the drug/metabolite transporter DMT | |||
| 2077 | M | M.CbaAAWORFFP (61% identity) | M.SraA1ORF2077P | |
| 2078 | selenocysteine-specific translation elongation | |||
| 2079 | predicted nucleic acid-binding protein, contains | |||
| 2080 | R | Mje19629ORF4845P (86% identity) | SraA1ORF2077P | |
| 2081 | ATPase components of ABC transporters with | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1284 | 104 aa hypothetical protein | |||
| 1285 | R | Bglgr6McrBP (71% identity) | SraA1McrB2P | |
| 1286 | R | ThuSgZ1McrCP (76% identity) | SraA1McrC2P | |
| 1287 | type IIA topoisomerase, B subunit | |||
| 1438 | 143 aa hypothetical protein | |||
| 1439 | R | Pspc21McrCP (96% identity) | SraA1McrCP | |
| 1440 | R | Pae14978McrBP (99% identity) | SraA1McrBP | |
| 1441 | type I site-specific restriction-modification | |||