Serpentinomonas mccroryi B1 |
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Putative Serpentinomonas mccroryi B1 RM systems
Ref: Suzuki,S. et al. Nat Commun (2014) In press
REBASE ref # 17593
Complete sequence: 2,606,868 bp
GenBank #: AP014569
REBASE acronym: SmcB1
Org_num: 12931
All begin SMCB_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3 | type IIA topoisomerase | |||
| 4 | M | M.VspLIG4ORF1003P (85% identity) | M.SmcB1ORF4P | |
| 5 | S | S.Rpu633ORF25705P (56% identity) | S.SmcB1ORF4P | |
| 6 | 336 aa hypothetical protein | |||
| 7 | prophage maintenance system killer protein | |||
| 8 | R | Tsp3ORF3474P (78% identity) | SmcB1ORF4P | |
| 9 | 639 aa hypothetical protein | |||
| 627 | virulence protein | |||
| 628 | R | Ath19377ORFBP (91% identity) | SmcB1ORF631P | |
| 629 | uncharacterized conserved protein | |||
| 630 | S | S.TspS2ORFCP (56% identity) | S.SmcB1ORF631P | |
| 631 | M | M.Bge22978ORF12835P (90% identity) | M.SmcB1ORF631P | |
| 632 | cAMP-binding protein - catabolite gene activator | |||
| 911 | phage-related protein | |||
| 912 | R | Tsp3ORF612P (76% identity) | SmcB1ORF915P | |
| 913 | predicted NTPase | |||
| 914 | S | S.Sna507IV (54% identity) | S.SmcB1ORF915P | |
| 915 | M | M.RguNS21ORF45P (87% identity) | M.SmcB1ORF915P | |
| 916 | sulfate permease and related transporters | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 224 | uncharacterized conserved protein | |||
| 225 | RM | CspZM22ORF14565P (71% identity) | SmcB1ORF225P | |
| 226 | predicted ATPase AAA+ superfamily | |||
| 665 | GTPase subunit of restriction endonuclease | |||
| 666 | V | V.BpsHAORFAP (69% identity) | V.SmcB1ORF666P | |
| 667 | adenylosuccinate lyase | |||
| 668 | GTPase subunit of restriction endonuclease | |||
| 669 | M | M.Csp2512ORFEP (85% identity) | ACCGGT | M.SmcB1ORF669P |
| 670 | predicted transcriptional regulators containing | |||
| 704 | 122 aa hypothetical protein | |||
| 705 | M | M1.AfeV8ORF8635P (92% identity) | M1.SmcB1ORF705P | |
| 706 | M | M1.SplGro7ORF20490P (81% identity) | M2.SmcB1ORF705P | |
| 707 | miscellaneous; hypothetical/global homology | |||
| 1705 | tryptophanyl-tRNA synthetase | |||
| 1706 | M | DNA modification methylase | M.SmcB1ORF1706P | |
| 1707 | restriction endonuclease | |||
| 1998 | DnaJ-class molecular chaperone with C-terminal | |||
| ??? | M | M.HspNH16ORFEP (75% identity) | M.SmcB1ORF1999P | |
| 2001 | uncharacterized conserved protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 636 | uncharacterized conserved protein | |||
| 637 | R | BhiL60ORF2246P (92% identity) | SmcB1ORF638P | |
| 638 | M | M.BhiL60ORF2246P (94% identity) | M.SmcB1ORF638P | |
| 639 | 68 aa hypothetical protein | |||
| 1485 | predicted rRNA methylase, SpoU class | |||
| 1486 | R | Cli1677ORF4285P (70% identity) | SmcB1ORF1487P | |
| ??? | M | M.RspORNL1ORF27960P (51% identity) | M.SmcB1ORF1487P | |
| 1488 | predicted amidophosphoribosyltransferase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1756 | 83 aa hypothetical protein | |||
| 1757 | R | AteAA22MrrP (77% identity) | SmcB1MrrP | |
| 1758 | uncharacterized conserved protein | |||