Lysobacter capsici AZ78 |
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Putative Lysobacter capsici AZ78 RM systems
Ref: Puopolo,G. et al. Genome Announc 2 (2) (2014)
REBASE ref # 17508
GenBank #: JAJA00000000
REBASE acronym: LcaAZ78
Org_num: 12859
All begin AZ78_, LHJ66_, LHJ67_, LHJ68_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 26965 | 42 aa hypothetical protein | |||
| ??? | S | S.LbrNSMJ23ORF12860P (53% identity) | S.LcaAZ78ORFAP | |
| ??? | S | S.LlaAG6ORFAP (38% identity) | S.LcaAZ78ORFDP | |
| ??? | S | LcrJM2ORF5P (17% identity) | S.LcaAZ78ORFBP | |
| 2055 | DUF5706 domain-containing protein | |||
| 2060 | M | M.Ssa7526I (99% identity) | GACNNNNNTGT | M.Sxy1693I |
| 2065 | S | S.SspMZ7ORF255P (53% identity) | GACNNNNNTGT | S.Sxy1693I |
| 2070 | R | ScoH62ORF8175P (99% identity) | GACNNNNNTGT | Sxy1693IP |
| 2075 | 67 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8880 | 573 aa hypothetical protein | |||
| 8885 | M | M.RspMIZ03ORF1117P (82% identity) | ACCGGT | M.LcaAZ78ORF8885P |
| 8890 | DNA mismatch repair protein | |||
| 5140 | LysR family transcriptional regulator | |||
| 5145 | R | R2.SxyPL8ORF12000P (76% identity) | R1.Sxy1704ORF5155P | |
| 5150 | R | R1.SxyPL8ORF12000P (97% identity) | R2.Sxy1704ORF5155P | |
| 5155 | M | M2.SxyPL8ORF12000P (97% identity) | M1.Sxy1704ORF5155P | |
| 5160 | M | M1.SxyPL8ORF12000P (99% identity) | M2.Sxy1704ORF5155P | |
| 5165 | helix-turn-helix transcriptional regulator | |||
| 11840 | 23S rRNA | |||
| 11845 | RM | Sxy1521I (100% identity) | GGGTNA | Sxy1780I |
| 11850 | 84 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13485 | 2,3-butanediol dehydrogenase | |||
| 13490 | M | M.SscB958BORF13785P (95% identity) | GCTCA | M.Sxy1693II |
| 13495 | R | SscB958BORF13785P (95% identity) | GCTCA | Sxy1693IIP |
| 13500 | 271 aa hypothetical protein | |||
| 4460 | N-ethylmaleimide reductase | |||
| 4465 | R | LcaXL2ORF26535P (98% identity) | LcaAZ78ORF4470P | |
| 4470 | M | M.Lca55ORF5739P (98% identity) | M.LcaAZ78ORF4470P | |
| 4475 | 111 aa hypothetical protein | |||