Helicobacter pylori HLJ039 |
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Putative Helicobacter pylori HLJ039 RM systems
Ref: You,Y. et al. Gut Pathog 6 (1), 5 (2014)
REBASE ref # 17494
GenBank #: JAAA00000000
REBASE acronym: Hpy39
Org_num: 12823
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | type I restriction enzyme, S subunit | S.Hpy39ORFG1P | |
| ??? | S | 130 aa hypothetical protein, partial | S.Hpy39ORFF1P | |
| ??? | S | S.Hpy53ORFXP (61% identity) | S.Hpy39ORFBP | |
| ??? | R | HpyK034ORF2495P (97% identity) | Hpy39ORFBP | |
| ??? | R | HpySG04ORF2340P (91% identity) | Hpy39ORFRP | |
| ??? | M | M.HpyCHN4ORF2250P (97% identity) | M.Hpy39ORFRP | |
| ??? | S | S.HpyJ028ORF2470P (92% identity) | S.Hpy39ORFRP | |
| ??? | M | M.HpyGU71CORFMP (94% identity) | M.Hpy39ORFAP | |
| ??? | R | Hpyfe74ORF7605P (97% identity) | Hpy39ORFOP | |
| ??? | M | M.HpyJA112VII (97% identity) | M.Hpy39ORFOP | |
| ??? | S | S.Hpy199ORFDP (98% identity) | S.Hpy39ORFOP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | RM | 289 aa hypothetical protein K751_08545 | Hpy39ORFSAP | |
| ??? | RM | HpyK051ORF255P (69% identity) | Hpy39ORFSBP | |
| ??? | R | Hpyfe65ORF3785P (100% identity) | CCNNGG | Hpy39ORFH1P |
| ??? | M | M.HpyTW24IV (100% identity) | CCNNGG | M.Hpy39ORFH1P |
| ??? | R | Hpyfe115ORF7170P (97% identity) | GANTC | Hpy39ORFA1P |
| ??? | adenine specific DNA methyltransferase | |||
| ??? | 299 aa hypothetical protein MWE_0067 | |||
| ??? | M | M.HpyV008VI (99% identity) | GANTC | M.Hpy39ORFI1P |
| ??? | R | Hpyfe33ORF4780P (98% identity) | ACNGT | Hpy39ORFUP |
| ??? | M | M.Hpy256ORFEP (99% identity) | ACNGT | M.Hpy39ORFUP |
| ??? | glycosyltransferase 9 family protein | |||
| ??? | glycosyltransferase 9 family protein | |||
| ??? | M | M.HpyK029II (98% identity) | ATTAAT | M.Hpy39ORFVP |
| ??? | glycosyltransferase 9 family protein | |||
| ??? | R | Hpy63ORF905P (99% identity) | GTNNAC | Hpy39ORFFP |
| ??? | M | M.Hpyfe118ORF2920P (93% identity) | GTNNAC | M.Hpy39ORFFP |
| ??? | M | M.Hpyfe92ORF2245P (100% identity) | TCNNGA | M.Hpy39ORFHP |
| ??? | R | Hpyfe93ORF2050P (100% identity) | TCNNGA | Hpy39ORFHP |
| ??? | 1067 aa hypothetical protein | |||
| ??? | RM | Type IIG restriction-modification enzyme | Hpy39ORFDP | |
| ??? | RM | Hpyfe36ORF3825P (63% identity) | Hpy39ORFCP | |
| ??? | Type IIG restriction-modification enzyme | |||
| ??? | M | M2.Hpy377ORFFP (78% identity) | CCTC | M2.Hpy39ORFB1P |
| ??? | M | M1.HpyK019V (99% identity) | CCTC | M1.Hpy39ORFB1P |
| ??? | M | M.Hpybs3ORFGP (98% identity) | GATC | M.Hpy39ORFZP |
| ??? | R | HpyF234ORFEP (98% identity) | GATC | Hpy39ORFZP |
| ??? | M | adenine specific DNA methyltransferase | GANTC | M.Hpy39ORFA1P |
| ??? | R | Hpyfe115ORF7170P (97% identity) | GANTC | Hpy39ORFA1P |
| ??? | M | M.HpyK047I (99% identity) | CATG | M.Hpy39ORFJP |
| ??? | R | Hpyfe56ORF1435P (90% identity) | CATG | Hpy39ORFJP |
| ??? | M | M.HpyT027XV (96% identity) | GCGC | M.Hpy39ORFGP |
| ??? | M | M.HpyT027ORF7715P (99% identity) | M.Hpy39ORFE1P | |
| ??? | Type II restriction enzyme | |||
| ??? | DNA methyltransferase | |||
| ??? | R | HpyMA08IIP (99% identity) | TGCA | Hpy39ORFD1P |
| ??? | M | M.HpyML3ORFHP (98% identity) | TGCA | M.Hpy39ORFD1P |
| ??? | DEAD/DEAH box helicase | |||
| ??? | RM | Hpy83ORF1501P (91% identity) | Hpy39ORFNP | |
| ??? | M | M.Hpyfe59ORF5575P (100% identity) | CTNAG | M.Hpy39ORFYP |
| ??? | R | Hpy4125ORFRP (99% identity) | CTNAG | Hpy39ORFYP |
| ??? | R | Hpy271ORFIP (97% identity) | GTAC | Hpy39ORFEP |
| ??? | M | M.HpyP88ORFEP (99% identity) | GTAC | M.Hpy39ORFEP |
| ??? | R | Hpy271ORFYP (97% identity) | CCATC | Hpy39ORFC1P |
| ??? | M | M2.HpysHP34ORF1580P (99% identity) | CCATC | M2.Hpy39ORFC1P |
| ??? | M | M1.HpyH137ORF145P (99% identity) | GATGG | M1.Hpy39ORFC1P |
| ??? | RM | Hpy274ORF1659P (97% identity) | Hpy39ORFTP | |
| ??? | S | S2.Hpy1139ORFIP (93% identity) | S.Hpy39ORFTP | |
| ??? | M | M.HpySG36IV (99% identity) | CCGG | M.Hpy39ORFWP |
| ??? | R | HpyTW05VIP (81% identity) | CCGG | Hpy39ORFWP |
| ??? | DNA methyltransferase | |||
| ??? | 191 aa hypothetical protein | |||
| ??? | M | M.Hpyfe93ORF5890P (99% identity) | TCGA | M.Hpy39ORFXP |
| ??? | R | R1.Hpyfe17ORF6170P (98% identity) | Hpy39ORFKP | |
| ??? | 5-methylcytosine-specific restriction enzyme B | |||
| ??? | ATPase AAA | |||
| ??? | M | M1.HpyK28ORF990P (99% identity) | M.Hpy39ORFLP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.Hpyfe79ORF7170P (95% identity) | M.Hpy39ORFQP | |
| ??? | R | Hpyfe51ORF7155P (95% identity) | Hpy39ORFQP | |
| ??? | M | M.HpySG03ORF7385P (97% identity) | M.Hpy39ORFMP | |
| ??? | R | Hpy271ORFZP (97% identity) | Hpy39ORFMP | |
| ??? | type II restriction-modification enzyme | |||
| ??? | M | M.HpyGU62AORFB1P (97% identity) | M.Hpy39ORFIP | |
| ??? | R | HpyUM032ORF4185P (94% identity) | Hpy39ORFIP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | Type II restriction enzyme | |||
| ??? | R | 5-methylcytosine-specific restriction enzyme B | Hpy39McrBP | |
| ??? | ATPase AAA | |||
| ??? | 5-methylcytosine-specific restriction enzyme B | |||
| ??? | R | ATPase AAA | Hpy39McrB2P | |
| ??? | DNA-cytosine methyltransferase | |||