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Putative Clostridium pasteurianum NRRL B-598 RM systems
Ref: Kolek,J. et al. Genome Announc 2 (2), e00192-14 (2014)
REBASE ref # 17345
Sequence length: | GenBank #: | |
Chromosome: | 6,186,993 bp | CP011966 |
wgs: | 6,041,878 bp | AYXR00000000 (NZ_AYXR00000000) |
REBASE acronym: Cpa598
Org_num: 12725
All begin X276_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
12370 | 141 aa hypothetical protein | |||
27120 | S | S.Cbo11219ORF14235P (43% identity) | GAYNNNNNNCTAG | S.Cpa598II |
12360 | M | M.Csc25775ORFJP (96% identity) | GAYNNNNNNCTAG | M.Cpa598II |
12355 | R | CdrSL1ORF8600P (91% identity) | GAYNNNNNNCTAG | Cpa598IIP |
27200 | DUF3037 domain-containing protein | |||
10635 | S | S.Vsp16ORF1247P (42% identity) | GAAYNNNNNNNRTANYC | S.Cpa598I |
10630 | M | M.CbeG117ORFCP (97% identity) | GAAYNNNNNNNRTANYC | M.Cpa598I |
10625 | 374 aa hypothetical protein | |||
10620 | R | CspMORF4102P (95% identity) | GAAYNNNNNNNRTANYC | Cpa598IP |
10615 | 189 aa hypothetical protein | |||
wgs | ||||
20755 | 141 aa hypothetical protein | |||
20760 | S | S.Cbo11219ORF14235P (43% identity) | GAYNNNNNNCTAG | S.Cpa598II |
20765 | M | M.Csc25775ORFJP (96% identity) | GAYNNNNNNCTAG | M.Cpa598II |
20770 | R | CdrSL1ORF8600P (91% identity) | GAYNNNNNNCTAG | Cpa598IIP |
20775 | membrane protein | |||
13805 | 252 aa hypothetical protein | |||
13810 | S | S.Vsp16ORF1247P (42% identity) | GAAYNNNNNNNRTANYC | S.Cpa598I |
13815 | M | M.CbeG117ORFCP (97% identity) | GAAYNNNNNNNRTANYC | M.Cpa598I |
13820 | 374 aa hypothetical protein | |||
13825 | R | CspMORF4102P (95% identity) | GAAYNNNNNNNRTANYC | Cpa598IP |
13830 | 189 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1560 | 416 aa hypothetical protein | |||
1555 | R | R1.Ces8ORF15090P (69% identity) | R2.Cpa598ORF20205P | |
27380 | R | R2.Ces8ORF15090P (63% identity) | R1.Cpa598ORF20205P | |
1545 | M | M2.CboKAPB3ORF12160P (84% identity) | M2.Cpa598ORF20205P | |
1540 | M | M1.CboKAPB3ORF12160P (87% identity) | M1.Cpa598ORF20205P | |
1535 | N-acetylmuramoyl-L-alanine amidase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
12470 | ATP-binding protein | |||
12465 | R | Cdi15410CORF14235P (94% identity) | Cpa598ORF12465P | |
12460 | 84 aa hypothetical protein | |||
wgs | ||||
27740 | R | Cdi15410CORF14235P (94% identity) | Cpa598ORF12465P | |
27745 | 361 aa hypothetical protein |