Salmonella enterica subsp. enterica serovar Enteritidis EC20120009 |
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Putative Salmonella enterica subsp. enterica serovar Enteritidis EC20120009 RM systems
Ref: Rehman,A. and Nash,J.H.E. unpublished
REBASE ref # 17688
Complete sequence: 4,685,849 bp
GenBank #: CP007438
REBASE acronym: Sen009
Org_num: 12669
All begin AU49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 155 | transporter | |||
| 160 | R | StySBLI (100% identity) | GGYANNNNNNTCG | Sen009ORF170P |
| 165 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.Sen009ORF170P |
| 170 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen009ORF170P |
| 175 | 90 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16050 | hydrolase | |||
| 16055 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen009DcmP |
| 16060 | V | very short patch repair endonuclease | V.Sen009DcmP | |
| 16065 | drug/metabolite exporter YedA | |||
| 10025 | 244 aa hypothetical protein | |||
| 10030 | M | M.SspA39ORFGP (86% identity) | M.Sen009ORF10030P | |
| 10040 | 75 aa hypothetical protein | |||
| 12650 | pseudogene | |||
| ??? | M | M.SensSZL38ORF19965P (97% identity) | M.Sen009ORF12655P | |
| 12660 | 75 aa hypothetical protein | |||
| 13555 | Fis family transcriptional regulator | |||
| 13560 | M | methyltransferase | ATGCAT | M.Sen009ORF13560P |
| 13565 | 54 aa hypothetical protein | |||
| 8005 | ribulose-phosphate 3-epimerase | |||
| 8010 | M | DNA adenine methylase | M.Sen009DamP | |
| 8015 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14030 | sugar transporter | |||
| 14035 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.Sen009ORF14035P |
| ??? | R | SenSL913ORF3124P (100% identity) | CAGAG | Sen009ORF14035P |
| 23880 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 170 | DNA methyltransferase | |||
| ??? | R | Ssp3CMrrP (100% identity) | Sen009MrrP | |
| 195 | restriction endonuclease subunit M | |||