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Putative Salmonella enterica subsp. enterica serovar Enteritidis EC20100088 RM systems
Ref: Rehman,A. and Nash,J.H.E. unpublished
REBASE ref # 17688
Complete sequence: 4,685,845 bp
GenBank #: CP007355
REBASE acronym: Sen88
Org_num: 12596
All begin AV76_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
24960 | transporter | |||
24965 | R | StySBLI (100% identity) | GGYANNNNNNTCG | Sen88ORF24975P |
24970 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.Sen88ORF24975P |
24975 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen88ORF24975P |
27140 | 90 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
5955 | hydrolase | |||
5960 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen88DcmP |
5965 | V | V.StyUK1DcmP (100% identity) | V.Sen88DcmP | |
25890 | drug/metabolite exporter YedA | |||
18665 | Fis family transcriptional regulator | |||
18670 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen88ORF18670P |
26765 | 54 aa hypothetical protein | |||
19200 | ribulose phosphate epimerase | |||
19205 | M | M.StyTDamP (100% identity) | GATC | M.Sen88DamP |
19210 | cell division protein DamX | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
1940 | sugar transporter | |||
1945 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.Sen88ORF1945P |
??? | R | SenSL913ORF3124P (100% identity) | CAGAG | Sen88ORF1945P |
25570 | 33 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
24975 | DNA methyltransferase | |||
??? | R | Ssp3CMrrP (100% identity) | Sen88MrrP | |
24990 | restriction endonuclease subunit M |