Salmonella enterica subsp. enterica serovar Enteritidis EC20121990 |
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Putative Salmonella enterica subsp. enterica serovar Enteritidis EC20121990 RM systems
Ref: Rehman,A. and Nash,J.H.E. unpublished
REBASE ref # 17688
Complete sequence: 4,685,848 bp
GenBank #: CP007411
REBASE acronym: Sen990
Org_num: 12645
All begin AV56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24680 | transporter | |||
| 24685 | R | StySBLI (100% identity) | GGYANNNNNNTCG | Sen990ORF24695P |
| 24690 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.Sen990ORF24695P |
| 24695 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen990ORF24695P |
| 26065 | 90 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5900 | hydrolase | |||
| 5905 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen990DcmP |
| 5910 | V | V.StyUK1DcmP (100% identity) | V.Sen990DcmP | |
| 5915 | drug/metabolite exporter YedA | |||
| 18430 | Fis family transcriptional regulator | |||
| 18435 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen990ORF18435P |
| 25830 | 54 aa hypothetical protein | |||
| 18955 | ribulose phosphate epimerase | |||
| 18960 | M | M.StyTDamP (100% identity) | GATC | M.Sen990DamP |
| 18965 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1925 | sugar transporter | |||
| 1930 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.Sen990ORF1930P |
| ??? | R | SenSL913ORF3124P (100% identity) | CAGAG | Sen990ORF1930P |
| 25185 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24695 | DNA methyltransferase | |||
| ??? | R | Ssp3CMrrP (100% identity) | Sen990MrrP | |
| 24710 | restriction endonuclease subunit M | |||
| 24695 | DNA methyltransferase | |||
| ??? | R | SenSE10MrrP (100% identity) | Sen990Mrr2P | |
| 24710 | restriction endonuclease subunit M | |||