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Putative Salmonella enterica subsp. enterica serovar Enteritidis EC20120007 RM systems
Ref: Rehman,A. and Nash,J.H.E. unpublished
REBASE ref # 17688
Complete sequence: 4,685,849 bp
GenBank #: CP007331
REBASE acronym: Sen007
Org_num: 12573
All begin AU47_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
25100 | transporter | |||
25105 | R | StySBLI (100% identity) | GGYANNNNNNTCG | Sen007ORF25115P |
25110 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.Sen007ORF25115P |
25115 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen007ORF25115P |
27030 | 90 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
5890 | hydrolase | |||
5895 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen007DcmP |
5900 | V | very short patch repair endonuclease | V.Sen007DcmP | |
5905 | multidrug DMT transporter | |||
14935 | endonuclease | |||
14940 | M | M.SspA39ORFGP (100% identity) | GATC | M.Sen007ORF14940P |
14945 | 75 aa hypothetical protein | |||
17765 | replication protein A | |||
17770 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen007ORF17770P |
17775 | 77 aa hypothetical protein | |||
18780 | Fis family transcriptional regulator | |||
18785 | M | methyltransferase | ATGCAT | M.Sen007ORF18785P |
26745 | 54 aa hypothetical protein | |||
19305 | ribulose phosphate epimerase | |||
19310 | M | DNA adenine methylase | GATC | M.Sen007DamP |
19315 | cell division protein DamX | |||
24945 | integrase | |||
24960 | R | SspSAL045ORF19515P (100% identity) | GAAC | Sen007ORF24960P |
24965 | 238 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
1915 | sugar transporter | |||
1920 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.Sen007ORF1920P |
??? | R | SenSL913ORF3124P (100% identity) | CAGAG | Sen007ORF1920P |
26125 | 33 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
25115 | DNA methyltransferase | |||
??? | R | Ssp3CMrrP (100% identity) | Sen007MrrP | |
25130 | restriction endonuclease subunit M |