Salmonella enterica subsp. enterica serovar Enteritidis EC20121180 |
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Putative Salmonella enterica subsp. enterica serovar Enteritidis EC20121180 RM systems
Ref: Rehman,A. and Nash,J.H.E. unpublished
REBASE ref # 17688
Complete sequence: 4,685,848 bp
GenBank #: CP007273
REBASE acronym: Sen180
Org_num: 12505
All begin AV75_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17890 | RNA polymerase-binding transcription factor | |||
| 17895 | R | StySBLI (93% identity) | Sen180ORF17895P | |
| 17900 | S | 275 aa hypothetical protein | S.Sen180ORF17895P | |
| 17905 | SsrA-binding protein | |||
| 27590 | pseudogene | |||
| 27600 | S | type I restriction-modification protein subunit | S.Sen180ORF27600P | |
| 27605 | acid phosphatase | |||
| 9490 | transporter | |||
| 17895 | R | StySBLI (100% identity) | GGYANNNNNNTCG | Sen180ORF22955P |
| 37155 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.Sen180ORF22955P |
| 22955 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen180ORF22955P |
| 22960 | 90 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 34170 | hydrolase | |||
| 34175 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen180DcmP |
| 27305 | V | V.StyUK1DcmP (100% identity) | V.Sen180DcmP | |
| 34180 | drug/metabolite exporter YedA | |||
| 2620 | crossover junction endodeoxyribonuclease | |||
| 2615 | M | M.Ssp89ORF1824P (100% identity) | GATC | M.Sen180ORF2615P |
| 2610 | 157 aa hypothetical protein | |||
| 18405 | 65 aa hypothetical protein | |||
| 18425 | M | M.Sfl60ORF25670P (100% identity) | M.Sen180ORF18425P | |
| 18430 | pseudogene | |||
| 36100 | Fis family transcriptional regulator | |||
| 28060 | M | methyltransferase | ATGCAT | M.Sen180ORF28060P |
| 36105 | 54 aa hypothetical protein | |||
| 10430 | ribulose phosphate epimerase | |||
| 36200 | M | DNA adenine methylase | GATC | M.Sen180DamP |
| 12505 | cell division protein DamX | |||
| 27950 | flagellar rod assembly protein FlgJ | |||
| 27955 | M | 169 aa hypothetical protein | ATGCAT | M.Sen180ORF27955P |
| 27965 | 163 aa hypothetical protein | |||
| 28355 | 297 aa hypothetical protein | |||
| 28360 | M | pseudogene | M.Sen180ORF28630P | |
| 28365 | metal-dependent phosphohydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 380 | sugar transporter | |||
| 375 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.Sen180ORF375P |
| ??? | R | SenSL913ORF3124P (100% identity) | CAGAG | Sen180ORF375P |
| 33545 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22365 | nitrate reductase | |||
| ??? | R | SenSL913MrrP (100% identity) | Sen180Mrr2P | |
| 22385 | citrate lyase subunit gamma | |||
| 22955 | DNA methyltransferase | |||
| ??? | R | restriction endonuclease | Sen180MrrP | |
| 37165 | 148 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10430 | ribulose-phosphate 3-epimerase | |||
| 10435 | M | 131 aa hypothetical protein | GATC | M.Sen180ORF10345P |
| 10440 | lipopolysaccharide transporter | |||
| 28355 | 297 aa hypothetical protein | |||
| 28360 | pseudogene | |||