Castellaniella defragrans 65Phen |
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Putative Castellaniella defragrans 65Phen RM systems
Ref: Petasch,J. et al. unpublished
REBASE ref # 17462
Complete sequence: 3,952,818 bp
GenBank #: HG916765
REBASE acronym: Cde65
Org_num: 12549
All begin BN940_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5971 | phospholipase D/Transphosphatidylase | |||
| 5976 | R | Dal16529ORF187P (98% identity) | Cde65ORF5986P | |
| 5981 | S | S.Bvi16232ORF6345P (48% identity) | S.Cde65ORF5986P | |
| 5986 | M | M.Dal16529ORF187P (83% identity) | M.Cde65ORF5986P | |
| 5991 | 45 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1531 | Cystathionine beta-lyase | |||
| 1536 | M | M.RsoRS10ORF975P (67% identity) | GTCGAC | M.Cde65ORF1536P |
| 1541 | R | Tsp3ORF1448P (49% identity) | GTCGAC | Cde65ORF1536P |
| 1546 | Periplasmic thiol:disulfide interchange protein | |||
| 2831 | Predicted transcriptional regulators | |||
| 2836 | M | M.ZraI (74% identity) | GACGTC | M.Cde65ORF2836P |
| ??? | R | ZraI (88% identity) | GACGTC | Cde65ORF2836P |
| 2841 | 58 aa hypothetical protein | |||
| 2901 | 59 aa hypothetical protein | |||
| 2906 | M | M1.FmyP3GORFCP (72% identity) | M1.Cde65ORF2906P | |
| 2911 | M | M2.SbaM52ORFCP (58% identity) | M2.Cde65ORF2906P | |
| 2916 | 55 aa hypothetical protein | |||
| 6506 | 185 aa hypothetical protein | |||
| 6511 | M | Cytosine-specific DNA methyltransferase | M.Cde65ORF6511P | |
| 6516 | 51 aa hypothetical protein | |||
| 9356 | 781 aa hypothetical protein | |||
| 9361 | M | M.Xor645ORF3205P (98% identity) | CCGCGG | M.Cde65ORF9361P |
| ??? | V | V.Xor644ORF3185P (99% identity) | V.Cde65ORF9361P | |
| 9371 | 43 aa hypothetical protein | |||
| 13716 | 1153 aa hypothetical protein | |||
| 13721 | RM | MgrYL28ORF5765P (74% identity) | Cde65ORF13721P | |
| 13726 | SMC domain protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 956 | 71 aa hypothetical protein | |||
| 961 | R | Lmi9aMrrP (97% identity) | Cde65MrrP | |
| 966 | transposase | |||
| 2991 | 230 aa hypothetical protein | |||
| 2996 | R | AevMAY27MrrP (69% identity) | Cde65Mrr2P | |
| 3006 | Glutamyl-tRNA reductase | |||