Arthrospira species PCC 8005 |
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Putative Arthrospira species PCC 8005 RM systems
Ref: Genoscope -,C.E.A. unpublished
REBASE ref # 10128
Complete sequence: 6,228,153 bp
GenBank #: FO818640
REBASE acronym: Asp8005
Org_num: 5960
All begin ARTHRO_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11149 | 91 aa conserved hypothetical protein | |||
| 11150 | S | S.Nsp0702ORF17615P (38% identity) | S.Asp8005ORF11156P | |
| 11151 | 46 aa hypothetical protein | |||
| 11152 | 144 aa conserved hypothetical protein | |||
| 11153 | 157 aa hypothetical protein | |||
| 11154 | 80 aa hypothetical protein | |||
| 11155 | 44 aa hypothetical protein | |||
| 11156 | 85 aa conserved hypothetical protein | |||
| ??? | M | M.AplC1ORF51010P (98% identity) | M.Asp8005ORF11156P | |
| 11158 | transposase, IS605 family (fragment) | |||
| 11159 | transposase (fragment) | |||
| 11160 | R | LinBM01ORF5200P (99% identity) | Asp8005ORF11156P | |
| 11161 | 476 aa hypothetical protein | |||
| 30450 | 56 aa conserved hypothetical protein (fragment) | |||
| 30451 | M | M.Lfu8579ORF13645P (98% identity) | M.Asp8005ORF30451P | |
| 30452 | 83 aa conserved hypothetical protein | |||
| 30465 | Rhodopsin-like G-protein coupled receptor | |||
| 30467 | M | Type I restriction-modification system | M.Asp8005ORF30467P | |
| 30468 | carbon storage regulator related protein | |||
| 30622 | 83 aa conserved hypothetical protein (fragment) | |||
| ??? | R | AplDDORFCP (99% identity) | Asp8005ORF30623P | |
| 30626 | Zinc metalloprotease | |||
| 50202 | conserved protein of unknown function | |||
| 50203 | R | Lfu8579ORF3950P (99% identity) | Asp8005ORF50209P | |
| 50204 | plasmid maintenance system antidote | |||
| 50205 | S | S2.Lfu8579ORF3950P (100% identity) | S.Asp8005ORF50209P | |
| 50207 | conserved protein of unknown function | |||
| 50208 | conserved protein of unknown function | |||
| 50209 | M | M.AmaCSORF1092P (99% identity) | M.Asp8005ORF50209P | |
| 50210 | conserved protein of unknown function | |||
| 50204 | plasmid maintenance system antidote | |||
| 50205 | S | S2.Lfu8579ORF3950P (100% identity) | S.Asp8005ORF11311P | |
| 50207 | conserved protein of unknown function | |||
| 60670 | Conserved protein of unknown function | |||
| 60671 | S | S.LfuKN01ORF26170P (100% identity) | S.Asp8005ORF60671P | |
| 60672 | type III restriction enzyme, res | |||
| 60698 | Peptidase S1 and S6 chymotrypsin/Hap | |||
| 60699 | M | M.AplC1ORF203850P (97% identity) | M.Asp8005ORF60699P | |
| 60700 | S | S.AplORF6670P (56% identity) | S.Asp8005ORF60699P | |
| 60701 | ATP-binding protein | |||
| 60702 | conserved protein of unknown function | |||
| ??? | R | LfuKN01ORF26025P (100% identity) | Asp8005ORF60699P | |
| 60705 | Anthranilate phosphoribosyltransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10058 | 526 aa conserved hypothetical protein | |||
| 10059 | M | M.Asp92DndCP (99% identity) | M.Asp8005DndCP | |
| 10060 | 661 aa conserved hypothetical protein | |||
| 10059 | 528 aa conserved hypothetical protein | |||
| 10060 | M | M.Lfu8579DndDP (99% identity) | M.Asp8005DndDP | |
| 10061 | Asparagine synthase (Glutamine-hydrolyzing) | |||
| 10252 | 175 aa conserved hypothetical protein | |||
| 10253 | M | M.LinBM01ORF1220P (98% identity) | TTCGAA | M.Asp8005ORF10253P |
| 10254 | R | LinBM01ORF1220P (99% identity) | TTCGAA | Asp8005ORF10253P |
| 10255 | 453 aa conserved hypothetical protein | |||
| 10378 | Phosphoribosyltransferase | |||
| ??? | R | LinBM01ORF1795P (99% identity) | ATGCAT | Asp8005ORF10381P |
| 10381 | M | M.SplZORFRP (100% identity) | ATGCAT | M.Asp8005ORF10381P |
| 10382 | Aminotransferase class V | |||
| 10854 | 4-hydroxybenzoate octaprenyltransferase | |||
| 10855 | M | M.LfuKN01ORF19175P (100% identity) | GCTAGC | M.Asp8005ORF10855P |
| 10856 | protein of unknown function | |||
| 10857 | R | R1.AplDDORFYP (100% identity) | GCTAGC | Asp8005ORF10855P |
| 10858 | 670 aa conserved hypothetical protein (secreted) | |||
| 10887 | CheY Response regulator receiver domain protein, | |||
| 10888 | RM | LinBM01ORF4030P (98% identity) | Asp8005ORF10888P | |
| 10889 | conserved protein of unknown function | |||
| 11168 | 47 aa conserved hypothetical protein (fragment) | |||
| ??? | R | Asp92ORFYP (100% identity) | CGTACG | Asp8005ORF11170P |
| 11170 | M | M.LinBM01ORF5260P (100% identity) | CGTACG | M.Asp8005ORF11170P |
| 11171 | site-specific tyrosine recombinase, | |||
| 11223 | 191 aa conserved hypothetical protein (fragment) | |||
| 11224 | M | M.LfuKN01ORF24245P (100% identity) | M.Asp8005ORF11224P | |
| 11225 | R | Asp92ORFPP (100% identity) | Asp8005ORF11224P | |
| 11226 | 717 aa hypothetical protein (secreted) | |||
| 11983 | conserved protein of unknown function | |||
| 11985 | M | M.LfuKN01ORF15025P (99% identity) | GCSGC | M.Asp8005ORF11985P |
| 11986 | conserved protein of unknown function | |||
| 12129 | cytotoxin, Haemolysin A-like | |||
| ??? | M | M.AplC1ORF630140P (99% identity) | CGATCG | M.Asp8005ORF12130P |
| 12132 | allophycocyanin beta-18 subunit | |||
| 30004 | transposase | |||
| ??? | R | Asp92ORFMP (98% identity) | GGTNACC | Asp8005ORF30008P |
| 30008 | M | M.LinBM01ORF10715P (99% identity) | GGTNACC | M.Asp8005ORF30008P |
| 30009 | S-transferase | |||
| 30351 | xanthine/uracil/vitamin C permease | |||
| 30352 | R | Ael3563ORF14685P (54% identity) | GGWCC | Asp8005ORF30353P |
| 30353 | M | M.AplC1ORF541210P (97% identity) | GGWCC | M.Asp8005ORF30353P |
| 30354 | Alcohol dehydrogenase class-3 | |||
| 40166 | 289 aa conserved hypothetical protein | |||
| 40167 | RM | LinBM01ORF15225P (99% identity) | Asp8005ORF40167P | |
| 40168 | 81 aa conserved hypothetical protein | |||
| 40254 | succinate dehydrogenase iron-sulfur subunit | |||
| 40255 | M | M.LinBM01ORF15660P (100% identity) | TCTAGA | M.Asp8005ORF40255P |
| 40256 | conserved protein of unknown function | |||
| 40296 | 359 aa conserved hypothetical protein (membrane) | |||
| 40297 | M | M.LfuKN01ORF8500P (99% identity) | M.Asp8005ORF40297P | |
| 40298 | 455 aa conserved hypothetical protein (secreted) | |||
| 40638 | 290 aa conserved hypothetical protein | |||
| 40640 | M | M.LfuKN01ORF7320P (96% identity) | GGYRCC | M.Asp8005ORF40640P |
| 40641 | R | LinBM01ORF17350P (100% identity) | GGYRCC | Asp8005ORF40640P |
| 40642 | cobalamin synthesis protein cobW | |||
| 40879 | Ribosomal RNA small subunit methyltransferase B | |||
| ??? | M | M.LfuKN01ORF6475P (100% identity) | TACGTA | M.Asp8005ORF40880P |
| 40882 | fragment II of Type-2 restriction enzyme | |||
| 40883 | fragment of Type-2 restriction enzyme | |||
| 40884 | C | C.LfuKN01ORF6475P (100% identity) | C.Asp8005ORF40880P | |
| 40885 | tRNA-Nucleotidyltransferase, polyA | |||
| 40960 | conserved protein of unknown function | |||
| 40961 | M | M.LfuKN01ORF6105P (100% identity) | TCTAGA | M.Asp8005ORF40961P |
| 40962 | 3-isopropylmalate dehydrogenase | |||
| 41022 | ATPase (AAA+ superfamily) | |||
| ??? | M | M.Asp92ORFG1P (94% identity) | M.Asp8005ORF41023P | |
| 41024 | superfamily II DNA/RNA helicase, SNF2 family | |||
| 50001 | protein of unknown function | |||
| 50002 | M | M.LfuKN01ORF3340P (100% identity) | CAGCTG | M.Asp8005ORF50002P |
| 50003 | C | C.Lfu8579ORF4815P (100% identity) | C.Asp8005ORF50002P | |
| 50004 | R | LfuKN01ORF3340P (99% identity) | CAGCTG | Asp8005ORF50002P |
| 50005 | 219 aa conserved hypothetical protein | |||
| 50008 | Lipase class 3 | |||
| 50009 | R | Asp8005ORF50002P (88% identity) | CAGCTG | Asp8005ORF50011P |
| 50010 | C | C.Lfu8579ORF4815P (100% identity) | C.Asp8005ORF50011P | |
| 50011 | M | M.LfuKN01ORF3340P (100% identity) | CAGCTG | M.Asp8005ORF50011P |
| 50012 | nucleoside-diphosphate-sugar epimerase | |||
| 60117 | Carbamoyl-phosphate synthase large chain | |||
| 60118 | M | M.LfuKN01ORF950P (100% identity) | RCATGY | M.Asp8005ORF60118P |
| 60119 | R | LfuKN01ORF950P (99% identity) | RCATGY | Asp8005ORF60118P |
| 60120 | C | C.Asp92ORFCP (100% identity) | C.Asp8005ORF60118P | |
| 60121 | conserved protein of unknown function | |||
| 60339 | conserved protein of unknown function | |||
| 60340 | RM | LinBM01ORF23735P (99% identity) | Asp8005ORF60340P | |
| 60341 | conserved protein of unknown function | |||
| 60367 | conserved protein of unknown function | |||
| 60368 | M | M.Lfu8579ORF2325P (100% identity) | CTGCAG | M.Asp8005ORF60368P |
| 60369 | UDP-N-acetyl glucosamine-2-epimerase | |||
| 60567 | Cytochrome c biogenesis protein transmembrane | |||
| ??? | R | LinBM01ORF24775P (100% identity) | CYCGRG | Asp8005ORF60570P |
| 60570 | M | M.LinBM01ORF24775P (99% identity) | CYCGRG | M.Asp8005ORF60570P |
| 60571 | CheC inhibitor of MCP methylation | |||
| 60665 | conserved protein of unknown function | |||
| 60666 | RM | Asp92ORFUP (86% identity) | Asp8005ORF60666P | |
| 60667 | helicase | |||
| 60753 | RM | AplC1ORF599P (89% identity) | Asp8005ORF60753P | |
| 60754 | 189 aa conserved hypothetical protein | |||
| 60965 | 55 aa hypothetical protein | |||
| 60966 | M | M.Asp92ORFSP (100% identity) | GRCGYC | M.Asp8005ORF60966P |
| 60967 | R | Asp92ORFSP (100% identity) | GRCGYC | Asp8005ORF60966P |
| 60968 | DNA repair protein recO (Recombination protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11672 | Glycosyl transferase, group 1 family | |||
| ??? | R | Asp92ORFA1P (99% identity) | Asp8005ORF11675P | |
| 11674 | ATPase | |||
| 11675 | M | M.Asp92ORFA1P (99% identity) | M.Asp8005ORF11675P | |
| 11676 | conserved exported protein of unknown function | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 40985 | transposase | |||
| 40986 | R | AplC1Mrr2P (99% identity) | Asp8005MrrP | |
| 40987 | alpha/beta fold, esterase-lipase superfamily | |||
| 60932 | 38 aa conserved hypothetical protein (fragment) | |||
| 60933 | R | AplDDGmrSDP (100% identity) | Asp8005GmrSDP | |
| 60934 | 50 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 60397 | S-adenosylmethionine decarboxylase proenzyme | |||
| 60398 | M | M.LfuKN01ORF2050P (100% identity) | GATC | M.Asp8005ORF60398P |
| 60399 | conserved protein of unknown function | |||