Lactobacillus rhamnosus 2166 |
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Putative Lactobacillus rhamnosus 2166 RM systems
Ref: Karlyshev,A.V. et al. Genome Announc 2 (1), e01222-13 (2014)
REBASE ref # 17179
Contig set: 3,016,360 bp
GenBank #: AVFG00000000 (NZ_AVFG00000000)
REBASE acronym: Lrh2166
Org_num: 12286
All begin N577_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11625 | 216 aa hypothetical protein | |||
| 11630 | R | LrhVSI43ORF9640P (100% identity) | Lrh2166ORF11635P | |
| 11635 | M | M.LrhVSI43ORF9640P (100% identity) | M.Lrh2166ORF11635P | |
| 11640 | S | S2.LrhY39IIIP (94% identity) | S1.Lrh2166ORF11635P | |
| 11645 | integrase | |||
| 11650 | S | type IC HsdS subunit | S2.Lrh2166ORF11635P | |
| 11655 | S | S1.LrhL31ORFAP (65% identity) | S3.Lrh2166ORF11635P | |
| 11660 | 268 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6725 | plasmid partitioning protein ParA | |||
| 6730 | RM | LrhKF7ORFBP (94% identity) | Lrh2166ORF6730P | |
| 6735 | transcriptional regulator | |||
| 6120 | 60 aa hypothetical protein | |||
| 6125 | M | M.Lrh23550ORF4045P (97% identity) | M.Lrh2166ORF6125P | |
| 6130 | 154 aa hypothetical protein | |||
| 8095 | amino acid permease family protein | |||
| 8100 | M | M.LrhsA5ORFDP (100% identity) | M.Lrh2166ORF8100P | |
| 8105 | 653 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5810 | XRE family transcriptional regulator | |||
| 5815 | R | LrhsA5MrrP (100% identity) | Lrh2166MrrP | |
| 5820 | 261 aa hypothetical protein | |||