Ref: Fiebig,A. et al. Stand Genomic Sci 8 (3), 480-490 (2013)

REBASE ref # 17167

Contig set: 3,159,235 bp

GenBank #: AOLV00000000 (NZ_AOLV00000000)

REBASE acronym: Rth16684

Org_num: 12264

 

All begin ruthe_

Type I
ORF Gene Most similar Specificity Name
 
2496 metal-dependent hydrolase
2497 R Pgi3ORF3751P (0% identity) Rth16684ORF2501P
2498 153 aa hypothetical protein
2499 233 aa hypothetical protein
2500 S S2.Pph9175ORF19465P (0% identity) S1.Rth16684ORF2501P
2501 M M.Pgi3ORF3751P (0% identity) M.Rth16684ORF2501P
2502 S S2.Pgi3ORF3751P (0% identity) S2.Rth16684ORF2501P
2503 128 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
2975 T/G mismatch-specific endonuclease
2976 M M.RspKDORF4111P (0% identity) M.Rth16684ORF2976P
2978 302 aa hypothetical protein
 
3015 94 aa hypothetical protein
3016 M M.PspOMORFLP (0% identity) M.Rth16684ORF3016P
3017 Site-specific DNA methylase
 
3016 DNA modification methylase
3017 M M.PspOMVI (0% identity) GATC M.Rth16684ORF3017P
3018 73 aa hypothetical protein
 
27 Superfamily II DNA/RNA helicase, SNF2 family
28 RM PcoRK1ORF5265P (0% identity) Rth16684ORF28P
29 HNH endonuclease
 
1868 RNase HII
1869 M M.Rme19309ORF3730P (0% identity) GANTC M.Rth16684ORF1869P
1870 alkane 1-monooxygenase
 
2520 126 aa hypothetical protein
2521 M M.Dal42ORF2587P (0% identity) M.Rth16684ORF2521P
2522 214 aa hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
3057 Integrase core domain protein
3058 M M.Rba456ORF353P (0% identity) M.Rth16684ORF3058P
3059 240 aa hypothetical protein
3060 R AbiC19ORF41P (0% identity) Rth16684ORF3058P
3061 22 aa hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
201 R Pam7685McrCP (0% identity) Rth16684McrCP
202 R RbaNRL2McrBP (0% identity) Rth16684McrBP
203 114 aa hypothetical protein