Thalassobacter arenae DSM 19593 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Thalassobacter arenae DSM 19593 RM systems
Ref: Riedel,J. et al. Stand Genomic Sci (2013) In press
REBASE ref # 17152
Contig set: 3,687,750 bp
GenBank #: AONI00000000 (NZ_AONI00000000)
REBASE acronym: Tar19593
Org_num: 12268
All begin thalar_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 387 | M | Type I restriction-modification system, | M.Tar19593ORF387P | |
| 388 | 124 aa hypothetical protein | |||
| 11 | 43 aa hypothetical protein | |||
| 12 | M | M.Rsp17631ORF14955P (56% identity) | M.Tar19593ORF12P | |
| 13 | S | S.RdeORF2233P (39% identity) | S.Tar19593ORF12P | |
| 14 | R | Psp582ORF665P (77% identity) | Tar19593ORF12P | |
| 15 | Retron-type RNA-directed DNA polymerase | |||
| 1595 | Site-specific recombinase XerC | |||
| 1596 | M | M.AgeIII (94% identity) | M.Tar19593ORF1596P | |
| 1597 | S | S.SspUCH001ORFCP (37% identity) | S.Tar19593ORF1596P | |
| 1598 | R | AgeIIIP (90% identity) | Tar19593ORF1596P | |
| 1599 | 182 aa hypothetical protein | |||
| 2143 | CopG domain-containing protein | |||
| 2144 | R | Rmu3ORF3928P (88% identity) | Tar19593ORF2145P | |
| 2145 | M | M.Rmu3ORF3928P (95% identity) | M.Tar19593ORF2145P | |
| 2146 | S | S.Sfa1865ORF11780P (57% identity) | S.Tar19593ORF2145P | |
| 2147 | 430 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 77 | 158 aa hypothetical protein | |||
| 78 | M | M.SspW027ORF14895P (91% identity) | RGATCY | M.Tar19593ORF78P |
| 79 | R | MspALG8ORF5670P (74% identity) | Tar19593ORF78P | |
| 80 | Aspartyl-tRNA synthetase / Aspartyl-tRNA(Asn) | |||
| 2169 | 438 aa hypothetical protein | |||
| 2170 | RM | SpsH46ORF16670P (77% identity) | Tar19593ORF2170P | |
| 2171 | 79 aa hypothetical protein | |||
| 3509 | Ribonuclease HII | |||
| 3510 | M | M.RbaS2214ORF17465P (83% identity) | GANTC | M.Tar19593ORF3510P |
| 3511 | 349 aa hypothetical protein | |||