Ref: Voss,B. et al. PLoS ONE 8 (3), E60224 (2013)

REBASE ref # 17422

Complete sequence: 5,462,271 bp

GenBank #: CP007203

REBASE acronym: Nsp9414

Org_num: 5673

 

All begin NSP_

Type I
ORF Gene Most similar Specificity Name
 
12660 56 aa hypothetical protein
12670 R Nsp0038ORF2979P (96% identity) Nsp9414ORF12720P
12680 89 aa hypothetical protein
12690 72 aa hypothetical protein
12700 S S.PfeB4ORF4109P (39% identity) S.Nsp9414ORF12720P
12710 archaeal coiled-coil protein
12720 M M.Nsp0039ORF1226P (82% identity) M.Nsp9414ORF12720P
12730 Type I restriction-modification system,
 
20240 NADH dehydrogenase
20250 R Nsp0039ORFLP (99% identity) Nsp9414ORF20310P
20260 48 aa hypothetical protein
20270 cytoplasmic protein
20280 VapC toxin protein
20290 79 aa hypothetical protein
20300 S Type I restriction-modification system, S.Nsp9414ORF20310P
20310 M M.Nsp0039ORFLP (91% identity) M.Nsp9414ORF20310P
20320 Translation initiation factor 3
 
29120 esterase/lipase/thioesterase family
29130 R Nsp0039ORFEP (43% identity) Nsp9414ORF29130P
29140 S S.DbaSRB1ORF2181P (37% identity) S.Nsp9414ORF29130P
29150 189 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
890 Flavodoxin reductases (ferredoxin-NADPH
900 R Nsp596ORF12900P (100% identity) CCTNAGG Nsp9414ORF910P
910 M M.Nsp596ORF12900P (100% identity) CCTNAGG M.Nsp9414ORF910P
920 conserved membrane protein, multidrug efflux
 
1100 Lipid-A-disaccharide synthase
1110 RM Nsp0039ORFNP (99% identity) CTGGAG Nsp9414ORF1110P
1120 158 aa hypothetical protein
 
6830 Superfamily II DNA/RNA helicase, SNF2 family
6840 RM Nsp9414ORFBP (43% identity) Nsp9414ORF6840AP
6850 RM Nsp9414ORFBP (33% identity) Nsp9414ORF6840BP
6860 RM Nsp9414ORFBP (21% identity) Nsp9414ORF6840CP
6870 190 aa hypothetical protein
 
6830 Superfamily II DNA/RNA helicase, SNF2 family
??? RM Nsp9414ORFBP (100% identity) Nsp9414ORFAP
6870 190 aa hypothetical protein
 
6830 Superfamily II DNA/RNA helicase, SNF2 family
??? RM Nsp9414ORFAP (100% identity) Nsp9414ORFBP
6870 190 aa hypothetical protein
 
7120 42 aa hypothetical protein
7130 M M.Nsp0039ORFAP (100% identity) GGTNACC M.Nsp9414ORF7130P
7140 R Nsp0039ORFAP (95% identity) GGTNACC Nsp9414ORF7130P
7150 65 aa hypothetical protein
 
9070 93 aa hypothetical protein
9080 R Nsp0039ORF2154P (96% identity) TTCGAA Nsp9414ORF9100P
9090 modification methylase NspV
9100 M M.Nsp0039ORF2154P (80% identity) M.Nsp9414ORF9100P
9110 194 aa hypothetical protein
 
10940 499 aa hypothetical protein
10950 RM Nsp596ORF16245P (97% identity) Nsp9414ORF10950P
10960 cytoplasmic protein
 
11620 265 aa hypothetical protein
11630 M M.Nsp596ORF19830P (97% identity) GGYRCC M.Nsp9414ORF11630P
11640 R Nsp596ORF19830P (88% identity) GGYRCC Nsp9414ORF11630P
11650 heme iron utilization protein
 
11970 69 aa hypothetical protein
11980 M M.Nsp596ORF19660P (93% identity) GGCC M.Nsp9414ORF11980P
11990 R Nsp596ORF19660P (100% identity) GGCC Nsp9414ORF11980P
12000 glycogen debranching enzyme like protein
 
12350 37 aa hypothetical protein
12360 M M.Nsp0039ORFBP (100% identity) GATC M.Nsp9414ORF21826P
12370 50 aa hypothetical protein
 
19130 Iron(III)-transport ATP-binding protein
19140 M M.Nsp0039ORF697P (100% identity) CTGCAG M.Nsp9414ORF19140P
19150 Type II restriction enzyme BsuBI
 
19140 DNA-cytosine methyltransferase
19150 R Type II restriction enzyme BsuBI CTGCAG Nsp9414ORF2911P
19160 RNA 3-terminal phosphate cyclase
 
20690 184 aa hypothetical protein
20700 RM Nsp596ORF17915P (98% identity) Nsp9414ORF20700P
20710 Cell division protein FtsH
 
22600 37 aa hypothetical protein
22610 M M.Nsp2601ORF29750P (57% identity) GTCGAC M.Nsp9414ORF22610P
22620 209 aa hypothetical protein
 
24980 Phycobilisome rod-core linker polypeptide,
24990 R Nsp0039ORFGP (100% identity) Nsp9414ORF25000P
25000 M M.Nsp0039ORFGP (100% identity) M.Nsp9414ORF25000P
25010 Pentapeptide repeat family protein
 
25560 281 aa hypothetical protein
25570 M M.Nsp0039ORFIP (97% identity) TCCGGA M.Nsp9414ORF25570P
25580 45 aa hypothetical protein
 
25950 45 aa hypothetical protein
25960 M DNA methylase, putative M.Nsp9414ORF25960P
25970 Permease
 
27100 Type II restriction enzyme, methylase subunits
27110 RM CraCC14ORF5010P (48% identity) Nsp9414ORF27110P
27120 ATP-dependent helicase
 
27100 RM Asp92ORFTP (12% identity) Nsp9414ORF27100P
27110 Type II restriction enzyme, methylase subunits
 
29800 Nitrogen assimilation transcriptional activator
29810 C C.Nsp0039ORF2341P (100% identity) C.Nsp9414ORF29830P
29820 R Nsp0039ORF2341P (100% identity) TGCGCA Nsp9414ORF29830P
29830 M M.Nsp0039ORF2341P (94% identity) TGCGCA M.Nsp9414ORF29830P
29840 membrane protein, possible involvement
 
32220 HigB toxin protein
32230 M M.Nsp0039ORFKP (99% identity) TCTAGA M.Nsp9414ORF32230P
32240 83 aa hypothetical protein
 
32360 480 aa hypothetical protein
32370 M M.Nsp0039ORFCP (98% identity) M.Nsp9414ORF13048P
32380 deoxyribose-phosphate aldolase
 
34150 229 aa hypothetical protein
34160 R Pga1313ORF21450P (81% identity) GGWCC Nsp9414ORF34170P
34170 M M.Ski73ORF38760P (89% identity) GGWCC M.Nsp9414ORF34170P
34180 HicB protein
 
34490 95 aa hypothetical protein
34500 RM Nsp0039ORF3001BP (100% identity) Nsp9414ORF5799P
34510 70 aa hypothetical protein
 
34520 88 aa hypothetical protein
34530 RM helicase domain protein Nsp9414ORF5814P
34540 Nitrogenase (molybdenum-iron) reductase and
 
40720 Nitrogenase (molybdenum-iron) reductase and
40730 M M.Psp001ORF15610P (81% identity) CAGCTG M.Nsp9414ORF40730P
40740 84 aa hypothetical protein
 
41020 HNH endonuclease
41030 M M.Nsp0039ORF4068P (100% identity) ACCTGC M.Nsp9414ORF41030P
41040 69 aa hypothetical protein
 
43950 37 aa hypothetical protein
43960 M M.Nsp596ORF7055P (100% identity) CGATCG M.Nsp9414ORF2726P
43970 Lipid-A-disaccharide synthase
 
45500 Transporter
45510 M M.Nsp0039ORFDP (93% identity) CAGCTG M.Nsp9414ORF45510P
45520 70 aa hypothetical protein
 
46130 38 aa hypothetical protein
46140 RM Asp90ORF11282P (87% identity) Nsp9414ORF46140P
46150 125 aa hypothetical protein
 
46500 Phage integrase
46510 R Nsp0039ORFFP (100% identity) CMGCKG Nsp9414ORF11884P
46520 M M.Nsp0039ORFFP (100% identity) CMGCKG M.Nsp9414ORF11884P
46530 56 aa hypothetical protein
 
50700 transcriptional regulator, XRE family
50710 R Nsp0039ORFHP (100% identity) RCATGY Nsp9414ORF50720P
50720 M M.Nsp0039ORFHP (100% identity) RCATGY M.Nsp9414ORF50720P
50730 Tryptophanyl-tRNA synthetase
 
51360 Excinuclease ABC subunit C
51370 M M.Nsp596ORF15055P (100% identity) GDGCHC M.Nsp9414ORF51370P
51380 65 aa hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
30100 XisI
30110 R Nsp0039ORF2370P (60% identity) Nsp9414ORF30120P
30120 M M.Asp90ORF10268P (94% identity) M.Nsp9414ORF30120P
30130 366 aa hypothetical protein
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