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Putative Nodularia spumigena CCY9414 RM systems
Ref: Voss,B. et al. PLoS ONE 8 (3), E60224 (2013)
REBASE ref # 17422
Complete sequence: 5,462,271 bp
GenBank #: CP007203
REBASE acronym: Nsp9414
Org_num: 5673
All begin NSP_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
12660 | 56 aa hypothetical protein | |||
12670 | R | Nsp0038ORF2979P (96% identity) | Nsp9414ORF12720P | |
12680 | 89 aa hypothetical protein | |||
12690 | 72 aa hypothetical protein | |||
12700 | S | S.PfeB4ORF4109P (39% identity) | S.Nsp9414ORF12720P | |
12710 | archaeal coiled-coil protein | |||
12720 | M | M.Nsp0039ORF1226P (82% identity) | M.Nsp9414ORF12720P | |
12730 | Type I restriction-modification system, | |||
20240 | NADH dehydrogenase | |||
20250 | R | Nsp0039ORFLP (99% identity) | Nsp9414ORF20310P | |
20260 | 48 aa hypothetical protein | |||
20270 | cytoplasmic protein | |||
20280 | VapC toxin protein | |||
20290 | 79 aa hypothetical protein | |||
20300 | S | Type I restriction-modification system, | S.Nsp9414ORF20310P | |
20310 | M | M.Nsp0039ORFLP (91% identity) | M.Nsp9414ORF20310P | |
20320 | Translation initiation factor 3 | |||
29120 | esterase/lipase/thioesterase family | |||
29130 | R | Nsp0039ORFEP (43% identity) | Nsp9414ORF29130P | |
29140 | S | S.DbaSRB1ORF2181P (37% identity) | S.Nsp9414ORF29130P | |
29150 | 189 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
890 | Flavodoxin reductases (ferredoxin-NADPH | |||
900 | R | Nsp596ORF12900P (100% identity) | CCTNAGG | Nsp9414ORF910P |
910 | M | M.Nsp596ORF12900P (100% identity) | CCTNAGG | M.Nsp9414ORF910P |
920 | conserved membrane protein, multidrug efflux | |||
1100 | Lipid-A-disaccharide synthase | |||
1110 | RM | Nsp0039ORFNP (99% identity) | CTGGAG | Nsp9414ORF1110P |
1120 | 158 aa hypothetical protein | |||
6830 | Superfamily II DNA/RNA helicase, SNF2 family | |||
6840 | RM | Nsp9414ORFBP (43% identity) | Nsp9414ORF6840AP | |
6850 | RM | Nsp9414ORFBP (33% identity) | Nsp9414ORF6840BP | |
6860 | RM | Nsp9414ORFBP (21% identity) | Nsp9414ORF6840CP | |
6870 | 190 aa hypothetical protein | |||
6830 | Superfamily II DNA/RNA helicase, SNF2 family | |||
??? | RM | Nsp9414ORFBP (100% identity) | Nsp9414ORFAP | |
6870 | 190 aa hypothetical protein | |||
6830 | Superfamily II DNA/RNA helicase, SNF2 family | |||
??? | RM | Nsp9414ORFAP (100% identity) | Nsp9414ORFBP | |
6870 | 190 aa hypothetical protein | |||
7120 | 42 aa hypothetical protein | |||
7130 | M | M.Nsp0039ORFAP (100% identity) | GGTNACC | M.Nsp9414ORF7130P |
7140 | R | Nsp0039ORFAP (95% identity) | GGTNACC | Nsp9414ORF7130P |
7150 | 65 aa hypothetical protein | |||
9070 | 93 aa hypothetical protein | |||
9080 | R | Nsp0039ORF2154P (96% identity) | TTCGAA | Nsp9414ORF9100P |
9090 | modification methylase NspV | |||
9100 | M | M.Nsp0039ORF2154P (80% identity) | M.Nsp9414ORF9100P | |
9110 | 194 aa hypothetical protein | |||
10940 | 499 aa hypothetical protein | |||
10950 | RM | Nsp596ORF16245P (97% identity) | Nsp9414ORF10950P | |
10960 | cytoplasmic protein | |||
11620 | 265 aa hypothetical protein | |||
11630 | M | M.Nsp596ORF19830P (97% identity) | GGYRCC | M.Nsp9414ORF11630P |
11640 | R | Nsp596ORF19830P (88% identity) | GGYRCC | Nsp9414ORF11630P |
11650 | heme iron utilization protein | |||
11970 | 69 aa hypothetical protein | |||
11980 | M | M.Nsp596ORF19660P (93% identity) | GGCC | M.Nsp9414ORF11980P |
11990 | R | Nsp596ORF19660P (100% identity) | GGCC | Nsp9414ORF11980P |
12000 | glycogen debranching enzyme like protein | |||
12350 | 37 aa hypothetical protein | |||
12360 | M | M.Nsp0039ORFBP (100% identity) | GATC | M.Nsp9414ORF21826P |
12370 | 50 aa hypothetical protein | |||
19130 | Iron(III)-transport ATP-binding protein | |||
19140 | M | M.Nsp0039ORF697P (100% identity) | CTGCAG | M.Nsp9414ORF19140P |
19150 | Type II restriction enzyme BsuBI | |||
19140 | DNA-cytosine methyltransferase | |||
19150 | R | Type II restriction enzyme BsuBI | CTGCAG | Nsp9414ORF2911P |
19160 | RNA 3-terminal phosphate cyclase | |||
20690 | 184 aa hypothetical protein | |||
20700 | RM | Nsp596ORF17915P (98% identity) | Nsp9414ORF20700P | |
20710 | Cell division protein FtsH | |||
22600 | 37 aa hypothetical protein | |||
22610 | M | M.Nsp2601ORF29750P (57% identity) | GTCGAC | M.Nsp9414ORF22610P |
22620 | 209 aa hypothetical protein | |||
24980 | Phycobilisome rod-core linker polypeptide, | |||
24990 | R | Nsp0039ORFGP (100% identity) | Nsp9414ORF25000P | |
25000 | M | M.Nsp0039ORFGP (100% identity) | M.Nsp9414ORF25000P | |
25010 | Pentapeptide repeat family protein | |||
25560 | 281 aa hypothetical protein | |||
25570 | M | M.Nsp0039ORFIP (97% identity) | TCCGGA | M.Nsp9414ORF25570P |
25580 | 45 aa hypothetical protein | |||
25950 | 45 aa hypothetical protein | |||
25960 | M | DNA methylase, putative | M.Nsp9414ORF25960P | |
25970 | Permease | |||
27100 | Type II restriction enzyme, methylase subunits | |||
27110 | RM | CraCC14ORF5010P (48% identity) | Nsp9414ORF27110P | |
27120 | ATP-dependent helicase | |||
27100 | RM | Asp92ORFTP (12% identity) | Nsp9414ORF27100P | |
27110 | Type II restriction enzyme, methylase subunits | |||
29800 | Nitrogen assimilation transcriptional activator | |||
29810 | C | C.Nsp0039ORF2341P (100% identity) | C.Nsp9414ORF29830P | |
29820 | R | Nsp0039ORF2341P (100% identity) | TGCGCA | Nsp9414ORF29830P |
29830 | M | M.Nsp0039ORF2341P (94% identity) | TGCGCA | M.Nsp9414ORF29830P |
29840 | membrane protein, possible involvement | |||
32220 | HigB toxin protein | |||
32230 | M | M.Nsp0039ORFKP (99% identity) | TCTAGA | M.Nsp9414ORF32230P |
32240 | 83 aa hypothetical protein | |||
32360 | 480 aa hypothetical protein | |||
32370 | M | M.Nsp0039ORFCP (98% identity) | M.Nsp9414ORF13048P | |
32380 | deoxyribose-phosphate aldolase | |||
34150 | 229 aa hypothetical protein | |||
34160 | R | Pga1313ORF21450P (81% identity) | GGWCC | Nsp9414ORF34170P |
34170 | M | M.Ski73ORF38760P (89% identity) | GGWCC | M.Nsp9414ORF34170P |
34180 | HicB protein | |||
34490 | 95 aa hypothetical protein | |||
34500 | RM | Nsp0039ORF3001BP (100% identity) | Nsp9414ORF5799P | |
34510 | 70 aa hypothetical protein | |||
34520 | 88 aa hypothetical protein | |||
34530 | RM | helicase domain protein | Nsp9414ORF5814P | |
34540 | Nitrogenase (molybdenum-iron) reductase and | |||
40720 | Nitrogenase (molybdenum-iron) reductase and | |||
40730 | M | M.Psp001ORF15610P (81% identity) | CAGCTG | M.Nsp9414ORF40730P |
40740 | 84 aa hypothetical protein | |||
41020 | HNH endonuclease | |||
41030 | M | M.Nsp0039ORF4068P (100% identity) | ACCTGC | M.Nsp9414ORF41030P |
41040 | 69 aa hypothetical protein | |||
43950 | 37 aa hypothetical protein | |||
43960 | M | M.Nsp596ORF7055P (100% identity) | CGATCG | M.Nsp9414ORF2726P |
43970 | Lipid-A-disaccharide synthase | |||
45500 | Transporter | |||
45510 | M | M.Nsp0039ORFDP (93% identity) | CAGCTG | M.Nsp9414ORF45510P |
45520 | 70 aa hypothetical protein | |||
46130 | 38 aa hypothetical protein | |||
46140 | RM | Asp90ORF11282P (87% identity) | Nsp9414ORF46140P | |
46150 | 125 aa hypothetical protein | |||
46500 | Phage integrase | |||
46510 | R | Nsp0039ORFFP (100% identity) | CMGCKG | Nsp9414ORF11884P |
46520 | M | M.Nsp0039ORFFP (100% identity) | CMGCKG | M.Nsp9414ORF11884P |
46530 | 56 aa hypothetical protein | |||
50700 | transcriptional regulator, XRE family | |||
50710 | R | Nsp0039ORFHP (100% identity) | RCATGY | Nsp9414ORF50720P |
50720 | M | M.Nsp0039ORFHP (100% identity) | RCATGY | M.Nsp9414ORF50720P |
50730 | Tryptophanyl-tRNA synthetase | |||
51360 | Excinuclease ABC subunit C | |||
51370 | M | M.Nsp596ORF15055P (100% identity) | GDGCHC | M.Nsp9414ORF51370P |
51380 | 65 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
30100 | XisI | |||
30110 | R | Nsp0039ORF2370P (60% identity) | Nsp9414ORF30120P | |
30120 | M | M.Asp90ORF10268P (94% identity) | M.Nsp9414ORF30120P | |
30130 | 366 aa hypothetical protein |