Dickeya solani RNS 08.23.3.1.A |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Dickeya solani RNS 08.23.3.1.A RM systems
Ref: Khayi,S. et al. Genome Announc 2 (1), e01270-13 (2014)
REBASE ref # 17145
| Sequence length: | GenBank #: | |
| Chromosome: | (contig set) | AMYI00000000 |
| Chromosome: | 4,922,468 bp | CP016928 |
REBASE acronym: Dso31A
Org_num: 12237
All begin D083_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | M | M.DsoMK16ORFBP (100% identity) | M.Dso31AORFDP | |
| ??? | S | S.DsoMK16ORFBP (100% identity) | S.Dso31AORFDP | |
| ??? | R | DsoMK16ORFBP (100% identity) | Dso31AORFDP | |
| ??? | S | S.DsoMK16ORFAP (100% identity) | S.Dso31AORFBP | |
| ??? | M | M.DsoMK16ORFAP (100% identity) | M.Dso31AORFBP | |
| ??? | R | DsoMK16ORFAP (100% identity) | Dso31AORFBP | |
| Chromosome | ||||
| 2999 | Prophage P4 integrase | |||
| 3000 | M | M.DsoMK16ORFBP (100% identity) | M.Dso31AORFDP | |
| 3001 | S | S.DsoMK16ORFBP (100% identity) | S.Dso31AORFDP | |
| 3002 | R | DsoMK16ORFBP (100% identity) | Dso31AORFDP | |
| 3003 | DNA-binding protein in cluster with | |||
| 3247 | 200 aa hypothetical protein | |||
| 3248 | S | S.DsoMK16ORFAP (100% identity) | S.Dso31AORFBP | |
| 3249 | M | M.DsoMK16ORFAP (100% identity) | M.Dso31AORFBP | |
| 3250 | R | DsoMK16ORFAP (100% identity) | Dso31AORFBP | |
| 3251 | Ribosomal-protein-S18p-alanine | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | M | M.DsoMK16ORFDP (100% identity) | M.Dso31AORFEP | |
| ??? | Histidin kinase-like protein | |||
| ??? | M | M.DsoMK16ORFEP (100% identity) | GATC | M.Dso31AORFAP |
| Chromosome | ||||
| 2138 | Ribulose-phosphate 3-epimerase | |||
| 2139 | M | M.DsoMK16ORFEP (100% identity) | GATC | M.Dso31AORFAP |
| 2140 | DamX, an inner membrane protein involved in bile | |||
| 3014 | Transporter, LysE family | |||
| 3015 | R | Dso99ORF445P (100% identity) | Dso31AORF3015P | |
| 3016 | transport protein | |||
| 4312 | 51 aa hypothetical protein | |||
| 4313 | M | M.DsoMK16ORFDP (100% identity) | M.Dso31AORFEP | |
| 4314 | Exonuclease SbcC | |||