Ref: Ding,H. et al. Genome Announc 2 (1), e00050-14 (2014)

REBASE ref # 17142

Contig set: 3,766,673 bp

GenBank #: AYQC00000000 (NZ_AYQC00000000)

REBASE acronym: RcaR121

Org_num: 12245

 

All begin U717_

Type I
ORF Gene Most similar Specificity Name
 
5960 integrase
5965 R RcaY262ORF5965P (1% identity) RcaR121ORF5970P
5970 M M.RcaY262ORF5965P (1% identity) M.RcaR121ORF5970P
5975 308 aa hypothetical protein
??? S S.RcaY262ORF5965P (1% identity) S.RcaR121ORF5970P
5995 ATPase AAA
 
11115 219 aa hypothetical protein
11120 R RcaY262ORF11125P (1% identity) RcaR121ORF11125P
??? S S.RcaY262ORF11125P (1% identity) S.RcaR121ORF11125P
11125 M M.RcaY262ORF11125P (1% identity) M.RcaR121ORF11125P
11130 DNA invertase
 
7995 547 aa hypothetical protein
8000 R RcaY262ORF8005P (1% identity) RcaR121ORF8005P
8005 M M.RcaY262ORF8005P (1% identity) M.RcaR121ORF8005P
8010 S S.RcaY262ORF8005P (1% identity) S.RcaR121ORF8005P
8015 312 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
1850 MarR family transcriptional regulator
1855 M M.RcaYW1ORF1750P (1% identity) GANTC M.RcaR121ORF1855P
1860 ribonuclease HII
 
5920 234 aa hypothetical protein
5925 M M1.RcaY262ORF5920P (1% identity) M1.RcaR121ORF5925P
5930 M M2.RcaY262ORF5920P (1% identity) M2.RcaR121ORF5925P
5935 173 aa hypothetical protein
 
4395 64 aa hypothetical protein
??? M M.RphNL1ORFAP (1% identity) M.RcaR121ORF4400P
4405 77 aa hypothetical protein
 
15135 499 aa hypothetical protein
15140 M M.RcaY262ORF15125P (1% identity) AGCT M.RcaR121ORF15140P
15145 59 aa hypothetical protein
 
15255 396 aa hypothetical protein
15260 M M1.RcaY262ORF15245P (1% identity) M1.RcaR121ORF15265P
15265 M M2.RcaY262ORF15245P (1% identity) M2.RcaR121ORF15265P
15275 sulfate transporter subunit
 
11500 115 aa hypothetical protein
??? M M.RcaY262ORF11510P (1% identity) M.RcaR121ORF11505P
11510 91 aa hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
7715 361 aa hypothetical protein
7720 M M.RcaY262ORF7715P (1% identity) M.RcaR121ORF7720P
7725 R RcaY262ORF7715P (1% identity) RcaR121ORF7720P
7730 recombinase
Type IV
ORF Gene Most similar Specificity Name
 
17010 heme ABC transporter ATP-binding protein
??? R RcaY262McrB2P (1% identity) RcaR121McrB2P
17020 elongation factor 4
 
7820 DeoR family transcriptional regulator
??? R RcaY262McrBP (1% identity) RcaR121McrBP
7830 R RcaY262McrCP (1% identity) RcaR121McrCP
7835 240 aa hypothetical protein