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Putative Rhodobacter capsulatus Y262 RM systems
Ref: Ding,H. et al. Genome Announc 2 (1), e00050-14 (2014)
REBASE ref # 17142
Contig set: 3,850,334 bp
GenBank #: AYQB00000000 (NZ_AYQB00000000)
REBASE acronym: RcaY262
Org_num: 12244
All begin U715_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
5955 | integrase | |||
5960 | R | RcaSBORF952P (100% identity) | RcaY262ORF5965P | |
5965 | M | M.RcaSBORF952P (100% identity) | M.RcaY262ORF5965P | |
5970 | 308 aa hypothetical protein | |||
??? | S | S.RcaSBORF952P (100% identity) | S.RcaY262ORF5965P | |
5990 | ATPase AAA | |||
7995 | 547 aa hypothetical protein | |||
8000 | R | RcaSBORF1325P (100% identity) | RcaY262ORF8005P | |
8005 | M | M.RcaSBORF1325P (100% identity) | M.RcaY262ORF8005P | |
8010 | S | S.RcaSBORF1325P (100% identity) | S.RcaY262ORF8005P | |
8015 | 312 aa hypothetical protein | |||
11115 | 219 aa hypothetical protein | |||
11120 | R | RcaSBORF1930P (100% identity) | RcaY262ORF11125P | |
??? | S | S.RcaSBORF1930P (100% identity) | S.RcaY262ORF11125P | |
11125 | M | M.RcaSBORF1930P (100% identity) | M.RcaY262ORF11125P | |
11130 | DNA invertase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1845 | MarR family transcriptional regulator | |||
1850 | M | M.RcaYW1ORF1750P (100% identity) | GANTC | M.RcaY262ORF1850P |
1855 | ribonuclease HII | |||
5915 | 234 aa hypothetical protein | |||
5920 | M | M.RcaSBORF943P (100% identity) | M1.RcaY262ORF5920P | |
5925 | M | M.RcaSBORF944P (100% identity) | M2.RcaY262ORF5920P | |
5930 | 173 aa hypothetical protein | |||
15120 | 499 aa hypothetical protein | |||
15125 | M | M.RcaSBORF2717P (100% identity) | AGCT | M.RcaY262ORF15125P |
15130 | 59 aa hypothetical protein | |||
15240 | 396 aa hypothetical protein | |||
15245 | M | M1.RcaSBORF2740P (100% identity) | M1.RcaY262ORF15245P | |
15250 | M | M2.RcaSBORF2740P (100% identity) | M2.RcaY262ORF15245P | |
15260 | sulfate transporter subunit | |||
4385 | 64 aa hypothetical protein | |||
??? | M | M.RphNL1ORFAP (100% identity) | M.RcaY262ORF4390P | |
4395 | 77 aa hypothetical protein | |||
11505 | 115 aa hypothetical protein | |||
??? | M | DNA methyltransferase | M.RcaY262ORF11510P | |
11515 | 91 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
7710 | 361 aa hypothetical protein | |||
7715 | M | M.RcaSBORF1260P (100% identity) | M.RcaY262ORF7715P | |
7720 | R | RcaSBORF1260P (100% identity) | RcaY262ORF7715P | |
7725 | recombinase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
7820 | 29 aa hypothetical protein | |||
??? | R | RcaSBMcrBP (100% identity) | RcaY262McrBP | |
7830 | R | RcaSBMcrCP (100% identity) | RcaY262McrCP | |
7835 | 240 aa hypothetical protein | |||
17000 | heme ABC transporter ATP-binding protein | |||
??? | R | RcaSBMcrB2P (100% identity) | RcaY262McrB2P | |
17010 | elongation factor 4 |