Ref: Ding,H. et al. Genome Announc 2 (1), e00050-14 (2014)

REBASE ref # 17142

Contig set: 3,811,946 bp

GenBank #: AYQA00000000 (NZ_AYQA00000000)

REBASE acronym: RcaB6

Org_num: 12243

 

All begin U716_

Type I
ORF Gene Most similar Specificity Name
 
2695 transposase IS5
2700 M M.RcaB6ORF10710P (0% identity) M.RcaB6ORF2700P
2705 80 aa hypothetical protein
 
10700 R Laq24565ORFIP (0% identity) RcaB6ORF10710P
10705 S S.PspJORF1940P (0% identity) S.RcaB6ORF10710P
10710 M M.RcaB6ORF2700P (0% identity) M.RcaB6ORF10710P
10715 113 aa hypothetical protein
 
9215 phospholipase
9220 M M.HspHAL1ORF15731P (0% identity) M.RcaB6ORF9220P
9225 S S.HspHAL1ORF15731P (0% identity) S.RcaB6ORF9220P
9230 pseudogene
9235 R MflKTORF2604P (0% identity) RcaB6ORF9220P
9240 501 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
5915 M M.Lci001ORFAP (0% identity) CCCGGG M.RcaB6ORF5915P
5920 ATPase
 
5935 156 aa hypothetical protein
5940 M M.PphHM1ORF144P (0% identity) GGCC M.RcaB6ORF5940P
 
10215 ATPase AAA
10220 RM M1.PpiP71ORF2916P (0% identity) RcaB6ORF10220P
10225 M M1.DspRLORF11080P (0% identity) M.RcaB6ORF10220P
10230 type III restriction endonuclease
 
10225 pseudogene
10230 RM PpiP71ORF2916P (0% identity) RcaB6ORF10230P
10235 USG protein
 
5500 730 aa hypothetical protein
5505 M M.RspK5ORF815P (0% identity) M.RcaB6ORF5505P
5510 V V.SspBHCAORFAP (0% identity) V.RcaB6ORF5505P
5515 54 aa hypothetical protein
 
6895 MarR family transcriptional regulator
6900 M M.RcaYW1ORF1750P (0% identity) GANTC M.RcaB6ORF6900P
6905 ribonuclease HII
Type IV
ORF Gene Most similar Specificity Name
 
5915 DNA methyltransferase
5920 R Lci001McrBP (0% identity) RcaB6McrBP
5925 R CinP73McrCP (0% identity) RcaB6McrCP
5930 363 aa hypothetical protein
 
2505 258 aa hypothetical protein
2510 R RcaY262McrCP (0% identity) RcaB6McrC2P
2515 chromosome partitioning protein ParB