Rhodobacter capsulatus B6 |
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Putative Rhodobacter capsulatus B6 RM systems
Ref: Ding,H. et al. Genome Announc 2 (1), e00050-14 (2014)
REBASE ref # 17142
Contig set: 3,811,946 bp
GenBank #: AYQA00000000 (NZ_AYQA00000000)
REBASE acronym: RcaB6
Org_num: 12243
All begin U716_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2695 | transposase IS5 | |||
| 2700 | M | M.LcaS216ORF7430P (73% identity) | M.RcaB6ORF2700P | |
| 2705 | 80 aa hypothetical protein | |||
| 10700 | R | Pye32053ORF4698P (75% identity) | RcaB6ORF10710P | |
| 10705 | S | S.PbaCO2ORF2947P (29% identity) | S.RcaB6ORF10710P | |
| 10710 | M | M.Pye32053ORF4698P (84% identity) | M.RcaB6ORF10710P | |
| 10715 | 113 aa hypothetical protein | |||
| 9215 | phospholipase | |||
| 9220 | M | M.Rba636ORFAP (64% identity) | M.RcaB6ORF9220P | |
| 9225 | S | S.Msa044ORF14545P (44% identity) | S.RcaB6ORF9220P | |
| 9230 | pseudogene | |||
| 9235 | R | JspS638ORF16540P (73% identity) | RcaB6ORF9220P | |
| 9240 | 501 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5915 | M | M.Lci001ORFAP (75% identity) | CCCGGG | M.RcaB6ORF5915P |
| 5920 | ATPase | |||
| 5935 | 156 aa hypothetical protein | |||
| 5940 | M | M.PphHM2ORF143P (13% identity) | GGCC | M.RcaB6ORF5940P |
| 10215 | ATPase AAA | |||
| 10220 | RM | M1.PpiP71ORF2916P (86% identity) | RcaB6ORF10220P | |
| 10225 | M | M1.DspRLORF11080P (75% identity) | M.RcaB6ORF10220P | |
| 10230 | type III restriction endonuclease | |||
| 10225 | pseudogene | |||
| 10230 | RM | PpiP71ORF2916P (85% identity) | RcaB6ORF10230P | |
| 10235 | USG protein | |||
| 5500 | 730 aa hypothetical protein | |||
| 5505 | M | M.Msp432AORF25255P (53% identity) | M.RcaB6ORF5505P | |
| 5510 | V | V.SspBHCAORFAP (52% identity) | V.RcaB6ORF5505P | |
| 5515 | 54 aa hypothetical protein | |||
| 6895 | MarR family transcriptional regulator | |||
| 6900 | M | M.RcaYW1ORF1750P (99% identity) | GANTC | M.RcaB6ORF6900P |
| 6905 | ribonuclease HII | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5915 | DNA methyltransferase | |||
| 5920 | R | CinP73McrBP (71% identity) | RcaB6McrBP | |
| 5925 | R | CinP73McrCP (69% identity) | RcaB6McrCP | |
| 5930 | 363 aa hypothetical protein | |||
| 2505 | 258 aa hypothetical protein | |||
| 2510 | R | McrBC 5-methylcytosine restriction system | RcaB6McrC2P | |
| 2515 | chromosome partitioning protein ParB | |||