Rhodobacter capsulatus YW2 |
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Putative Rhodobacter capsulatus YW2 RM systems
Ref: Ding,H. et al. Genome Announc 2 (1), e00050-14 (2014)
REBASE ref # 17142
Contig set: 3,777,626 bp
GenBank #: AYPZ00000000 (NZ_AYPZ00000000)
REBASE acronym: RcaYW2
Org_num: 12242
All begin U713_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3940 | 82 aa hypothetical protein | |||
| 3945 | R | RspAB25ORF20860P (94% identity) | RcaYW2ORF3965P | |
| 3950 | 252 aa hypothetical protein | |||
| 3955 | 143 aa hypothetical protein | |||
| 3960 | S | S.SzoXJ20ORFMP (33% identity) | S.RcaYW2ORF3965P | |
| 3965 | M | M.Pfi22803ORF11105P (96% identity) | M.RcaYW2ORF3965P | |
| 3970 | mobilization protein | |||
| 4475 | DNA invertase | |||
| 4480 | M | M.Rca37b4ORF13680P (96% identity) | M.RcaYW2ORF4480P | |
| 4485 | S | S.Psa8338ORF2972P (35% identity) | S.RcaYW2ORF4480P | |
| 4490 | R | Rca37b4ORF13680P (97% identity) | RcaYW2ORF4480P | |
| 4495 | 219 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16850 | chromosome segregation protein SMC | |||
| 16855 | RM | Pst25392ORF11885P (60% identity) | RcaYW2ORF16855P | |
| 16860 | helicase | |||
| 6290 | MarR family transcriptional regulator | |||
| 6295 | M | M.RcaYW1ORF1750P (99% identity) | GANTC | M.RcaYW2ORF6295P |
| 6300 | ribonuclease HII | |||
| 7270 | 365 aa hypothetical protein | |||
| 7275 | M | M.RphNL1ORFAP (94% identity) | M.RcaYW2ORF7275P | |
| 7280 | 64 aa hypothetical protein | |||
| 4075 | DEAD/DEAH box helicase | |||
| 4080 | RM | Rsp43ORFCP (68% identity) | RcaYW2ORF4080P | |
| 4085 | plasmid stability protein StbB | |||
| 4125 | 173 aa hypothetical protein | |||
| 4130 | M | M2.RcaY262ORF5920P (93% identity) | M1.RcaYW2ORF4130P | |
| 4135 | M | M.PyeTT13ORF12265P (68% identity) | M2.RcaYW2ORF4130P | |
| 4140 | 234 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16675 | 44 aa hypothetical protein | |||
| ??? | R | KspADMORFAP (67% identity) | RcaYW2ORF16685P | |
| 16685 | M | M.PspAO1ORF26265P (40% identity) | M.RcaYW2ORF16685P | |
| 16690 | transposase IS3 | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16620 | 129 aa hypothetical protein | |||
| 16625 | R | FaqSC52MrrP (56% identity) | RcaYW2MrrP | |
| 16630 | 278 aa hypothetical protein | |||