Ref: Karlyshev,A.V. et al. Genome Announc 2 (1), e01221-13 (2014)

REBASE ref # 17140

Sequence length:GenBank #:
Chromosome: 2,193,123 bp AVFH00000000 (NZ_AVFH00000000)
Chromosome: 2,500,140 bp CP079206

REBASE acronym: Lcr2029

Org_num: 12239

 

All begin N580_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
??? restriction endonuclease S
1890 M M.LcrVSI24ORF5295P (100% identity) M.Lcr2029ORF1890P
1895 abortive phage resistance protein
 
??? R Lcr2029ORF6265P (95% identity) Lcr2029ORF1410P
 
Chromosome
 
6245 SLAP domain-containing protein
6250 R LcrVSI24ORF5295P (99% identity) TACNNNNNNNTDCC Lcr2029ORF6265P
6255 ATP-binding protein
6260 RloB family protein
6265 M M.LcrVSI24ORF5295P (100% identity) TACNNNNNNNTDCC M.Lcr2029ORF6265P
6270 S S.LcrVSI24ORF5295P (100% identity) TACNNNNNNNTDCC S.Lcr2029ORF6265P
6275 SIR2 family protein
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
5100 addiction module toxin RelE
5105 S S.LcrVSI21ORF8365P (100% identity) S.Lcr2029ORF5110P
5110 RM LcrPMC201ORF4055P (100% identity) Lcr2029ORF5110P
5115 transposase
 
6305 XRE family transcriptional regulator
??? RM LcrPMC201ORF3455P (99% identity) Lcr2029ORF6310P
6325 166 aa hypothetical protein
 
6560 69 aa hypothetical protein
6565 M M.Lfa0062ORF1625P (72% identity) M.Lcr2029ORF6565P
6570 48 aa hypothetical protein
 
Chromosome
 
3670 helix-turn-helix transcriptional regulator
3675 RM LcrPMC201ORF3455P (100% identity) Lcr2029ORF3675P
3680 restriction endonuclease subunit S
 
3950 IS982 family transposase
3955 RM LcrPMC201ORF4055P (100% identity) Lcr2029ORF3955P
3960 S S.LcrVSI21ORF8365P (100% identity) S.Lcr2029ORF3955P
3965 type II toxin-antitoxin system YafQ family
 
8105 61 aa hypothetical protein
8110 M M.Seq9682ORF199P (59% identity) M.Lcr2029ORF8110P
8115 98 aa hypothetical protein
 
8180 154 aa hypothetical protein
8185 M M.Lcr1226ORF2885P (100% identity) M.Lcr2029ORF8185P
8190 prepilin peptidase
 
8240 JAB domain-containing protein
8245 M M.Lfa0062ORF1625P (72% identity) M.Lcr2029ORF6565P
8250 250 aa hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
Chromosome
 
9035 M M.LcrVSI21ORF1410P (32% identity) M.Lcr2029ORF9035P
??? R Lcr2029ORF1550P (99% identity) Lcr2029ORF9035P
9050 123 aa hypothetical protein
 
Chromosome
 
1535 glutamine-hydrolyzing GMP synthase
1540 M M.LcrVSI21ORF1410P (63% identity) M.Lcr2029ORF1540P
1545 IS982 family transposase
 
1545 IS982 family transposase
1550 M M.LcrVSI21ORF1410P (32% identity) M.Lcr2029ORF1550P
1555 R Lcr2029ORF9035P (99% identity) Lcr2029ORF1550P
1560 123 aa hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
10220 glutamate:gamma-aminobutyrate antiporter
10225 R LcrVSI21ORF420P (100% identity) Lcr2029ORF10225P
10230 pseudogene
 
Chromosome
 
530 amino acid permease
535 R LcrVSI21ORF420P (100% identity) Lcr2029ORF10225P
540 beta-lactamase family protein
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