Ref: Yamamoto,T. unpublished

REBASE ref # 9709

Sequence length:GenBank #:
Chromosome: 4,522,967 bp FLKR00000000 (NZ_FLKR00000000)
chromosome I: 4,638,126 bp LT615371
chromosome I: 4,638,126 bp LT615375
chromosome I: 4,638,126 bp LT615372
chromosome I: 4,638,126 bp LT615373
chromosome I: 4,638,126 bp LT615376
chromosome I: 4,638,126 bp LT615377
chromosome I: 4,638,126 bp LT615378
chromosome I: 4,638,126 bp LT615379
chromosome I: 4,638,126 bp LT615374
chromosome phage_14408_1: 41,305 bp LT599830
chromosome WI1: 4,809,920 bp LT838196
chromosome WI2: 4,812,814 bp LT838200
plasmid NRZ14408_C: 5,344,876 bp LT599825
plasmid p14408_1: 137,186 bp LT599826
plasmid p14408_2: 88,196 bp LT599827
plasmid p14408_M1: 238,073 bp LT599829
plasmid pO86A1: 120,730 bp AB255435 (NC_008460)
plasmid pWI1-incFII: 60,622 bp LT838198
plasmid pWI1-incI1: 83,831 bp LT838199
plasmid pWI1-KPC3: 54,518 bp LT838197
plasmid pWI2-incFII: 60,622 bp LT838203
plasmid pWI2-incI1: 83,831 bp LT838204

REBASE acronym: EcopO86

Org_num: 4536

 

All begin ECWI1_, ECWI1_P, ECWI2_, ECWI2_P, orf, ORF_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
185 methylated adenine and cytosine restriction protein
186 R Msa17ORFC2P (100% identity) AACNNNNNNGTGC Eco26R793ORFBP
194 M M.SenHNK130ORF17125P (100% identity) AACNNNNNNGTGC M.Eco26R793ORFBP
198 S S.SenHNK130ORF17125P (100% identity) AACNNNNNNGTGC S.Eco26R793ORFBP
199 114 aa hypothetical protein ECJG_03568
 
chromosome I
 
??? 5-methylcytosine-specific restriction enzyme B
??? S S.SenHNK130ORF17125P (100% identity) AACNNNNNNGTGC S.Eco101EORFAP
??? M M.SenHNK130ORF17125P (100% identity) AACNNNNNNGTGC M.Eco101EORFAP
??? R Msa17ORFC2P (100% identity) AACNNNNNNGTGC Eco101EORFAP
??? Mrr restriction system protein
 
chromosome I
 
??? 5-methylcytosine-specific restriction enzyme B
??? S S.SenHNK130ORF17125P (100% identity) AACNNNNNNGTGC S.Eco107EORFAP
??? M M.SenHNK130ORF17125P (100% identity) AACNNNNNNGTGC M.Eco107EORFAP
??? R Msa17ORFC2P (100% identity) AACNNNNNNGTGC Eco107EORFAP
??? Mrr restriction system protein
 
chromosome I
 
??? 5-methylcytosine-specific restriction enzyme B
??? S S.SenHNK130ORF17125P (100% identity) AACNNNNNNGTGC S.Eco102EORFAP
??? M M.SenHNK130ORF17125P (100% identity) AACNNNNNNGTGC M.Eco102EORFAP
??? R Msa17ORFC2P (100% identity) AACNNNNNNGTGC Eco102EORFAP
??? Mrr restriction system protein
 
chromosome I
 
??? 5-methylcytosine-specific restriction enzyme B
??? S S.SenHNK130ORF17125P (100% identity) AACNNNNNNGTGC S.Eco105EORFAP
??? M M.SenHNK130ORF17125P (100% identity) AACNNNNNNGTGC M.Eco105EORFAP
??? R Msa17ORFC2P (100% identity) AACNNNNNNGTGC Eco105EORFAP
??? Mrr restriction system protein
 
chromosome I
 
??? 5-methylcytosine-specific restriction enzyme B
??? S S.SenHNK130ORF17125P (100% identity) AACNNNNNNGTGC S.Eco109EORFAP
??? M M.SenHNK130ORF17125P (100% identity) AACNNNNNNGTGC M.Eco109EORFAP
??? R Msa17ORFC2P (100% identity) AACNNNNNNGTGC Eco109EORFAP
??? Mrr restriction system protein
 
chromosome I
 
??? 5-methylcytosine-specific restriction enzyme B
??? S S.SenHNK130ORF17125P (100% identity) AACNNNNNNGTGC S.Eco106EORFAP
??? M M.SenHNK130ORF17125P (100% identity) AACNNNNNNGTGC M.Eco106EORFAP
??? R Msa17ORFC2P (100% identity) AACNNNNNNGTGC Eco106EORFAP
??? Mrr restriction system protein
 
chromosome I
 
??? 5-methylcytosine-specific restriction enzyme B
??? S S.SenHNK130ORF17125P (100% identity) AACNNNNNNGTGC S.Eco103EORFAP
??? M M.SenHNK130ORF17125P (100% identity) AACNNNNNNGTGC M.Eco103EORFAP
??? R Msa17ORFC2P (100% identity) AACNNNNNNGTGC Eco103EORFAP
??? Mrr restriction system protein
 
chromosome I
 
??? 5-methylcytosine-specific restriction enzyme B
??? S S.SenHNK130ORF17125P (100% identity) AACNNNNNNGTGC S.Eco108EORFAP
??? M M.SenHNK130ORF17125P (100% identity) AACNNNNNNGTGC M.Eco108EORFAP
??? R Msa17ORFC2P (100% identity) AACNNNNNNGTGC Eco108EORFAP
??? Mrr restriction system protein
 
chromosome I
 
??? 5-methylcytosine-specific restriction enzyme B
??? S S.SenHNK130ORF17125P (100% identity) AACNNNNNNGTGC S.Eco104EORFAP
??? M M.SenHNK130ORF17125P (100% identity) AACNNNNNNGTGC M.Eco104EORFAP
??? R Msa17ORFC2P (100% identity) AACNNNNNNGTGC Eco104EORFAP
??? Mrr restriction system protein
 
chromosome WI1
 
3974 Z1226 protein
3975 M M.SflN110ORF19045P (100% identity) CCANNNNNNNNTGAA M.EcoWI1ORF3975P
3976 S S.SflN110ORF19045P (100% identity) CCANNNNNNNNTGAA S.EcoWI1ORF3975P
3977 R SflN110ORF19045P (100% identity) CCANNNNNNNNTGAA EcoWI1ORF3975P
3978 FIG00640476: hypothetical protein
 
chromosome WI2
 
3971 Z1226 protein
3972 M M.SflN110ORF19045P (100% identity) CCANNNNNNNNTGAA M.EcoWI2ORF3972P
3973 S S.SflN110ORF19045P (100% identity) CCANNNNNNNNTGAA S.EcoWI2ORF3972P
3974 R SflN110ORF19045P (100% identity) CCANNNNNNNNTGAA EcoWI2ORF3972P
3975 FIG00640476: hypothetical protein
 
plasmid NRZ14408_C
 
??? R EcoZ147ORF19045P (99% identity) Eco14408ORFHP
??? S S.Ecos67ORF22160P (99% identity) S.Eco14408ORFHP
??? M M.EcoNT1F25ORFBP (99% identity) M.Eco14408ORFHP
 
??? R Eco6C06ORF21835P (99% identity) CACNNNNNNNGTTG Eco14408ORFAP
??? M M.SflTORF4636P (100% identity) CACNNNNNNNGTTG M.Eco14408ORFAP
??? S S.Ecoi362ORF3832P (100% identity) CACNNNNNNNGTTG S.Eco14408ORFAP
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
124 ribulose-phosphate 3-epimerase
126 M M.UbaC1152DamP (100% identity) GATC M.Eco26R793DamP
129 cell division protein DamX
 
126 Fis family transcriptional regulator
128 M M.SflSTLE4ORF2240P (100% identity) ATGCAT M.Eco26R793ORFCP
129 membrane protein
 
149 drug/metabolite exporter YedA
150 V V.Msa17DcmP (100% identity) V.Eco26R793DcmP
153 M M.SflLIN6DcmP (100% identity) CCWGG M.Eco26R793DcmP
155 Chain A, Crystal Structure Of A Metal-Dependent Phosphohydrolase With Conserved Hd Domain From Escherichia Coli In Complex With Nickel Ions. Northeast Structural Genomics Consortium Target Er63
 
chromosome I
 
??? V V.Msa17DcmP (100% identity) V.Eco101EDcmP
??? M M.SflLIN6DcmP (100% identity) CCWGG M.Eco101EDcmP
 
??? M M.SflSTLE4ORF2240P (100% identity) ATGCAT M.Eco101EORFCP
 
chromosome I
 
??? V V.Msa17DcmP (100% identity) V.Eco107EDcmP
??? M M.SflLIN6DcmP (100% identity) CCWGG M.Eco107EDcmP
 
??? M M.EcoRR1ORF16650P (100% identity) ATGCAT M.Eco107EORFCP
 
chromosome I
 
??? V V.Msa17DcmP (100% identity) V.Eco102EDcmP
??? M M.SflLIN6DcmP (100% identity) CCWGG M.Eco102EDcmP
 
??? M M.SflSTLE4ORF2240P (100% identity) ATGCAT M.Eco102EORFCP
 
chromosome I
 
??? V V.Msa17DcmP (100% identity) V.Eco105EDcmP
??? M M.SflLIN6DcmP (100% identity) CCWGG M.Eco105EDcmP
 
??? M M.EcoRR1ORF16650P (100% identity) ATGCAT M.Eco105EORFCP
 
chromosome I
 
??? V V.Msa17DcmP (100% identity) V.Eco109EDcmP
??? M M.SflLIN6DcmP (100% identity) CCWGG M.Eco109EDcmP
 
??? M M.EcoRR1ORF16650P (100% identity) ATGCAT M.Eco109EORFCP
 
chromosome I
 
??? V V.Msa17DcmP (100% identity) V.Eco106EDcmP
??? M M.SflLIN6DcmP (100% identity) CCWGG M.Eco106EDcmP
 
??? M M.EcoRR1ORF16650P (100% identity) ATGCAT M.Eco106EORFCP
 
chromosome I
 
??? V V.Msa17DcmP (100% identity) V.Eco103EDcmP
??? M M.SflLIN6DcmP (100% identity) CCWGG M.Eco103EDcmP
 
??? M M.SflSTLE4ORF2240P (100% identity) ATGCAT M.Eco103EORFCP
 
chromosome I
 
??? V V.Msa17DcmP (100% identity) V.Eco104EDcmP
??? M M.SflLIN6DcmP (100% identity) CCWGG M.Eco104EDcmP
 
??? M M.SflSTLE4ORF2240P (100% identity) ATGCAT M.Eco104EORFCP
 
chromosome I
 
??? V V.Msa17DcmP (100% identity) V.Eco108EDcmP
??? M M.SflLIN6DcmP (100% identity) CCWGG M.Eco108EDcmP
 
??? M M.EcoRR1ORF16650P (100% identity) ATGCAT M.Eco108EORFCP
 
chromosome WI1
 
340 DamX, an inner membrane protein involved in bile
341 M M.SspPIBDamP (100% identity) GATC M.EcoWI1DamP
342 Ribulose-phosphate 3-epimerase
 
461 FIG00638667: hypothetical protein
462 M M.Ssp28760ORF20045P (100% identity) ATGCAT M.EcoWI1ORF462P
463 DNA-binding protein Fis
 
1813 metal-dependent phosphohydrolase
1814 M M.SspS13DcmP (100% identity) CCWGG M.EcoWI1DcmP
1815 V V.SsoSE61DcmP (100% identity) V.EcoWI1DcmP
1816 Permease of the drug/metabolite transporter
 
2503 conserved domain protein
2504 M M.Sen58011ORF9805P (100% identity) M.EcoWI1ORF2504P
2505 LygF
 
3130 Phage NinX
3131 M M.SflWW1ORF7070P (100% identity) GATC M.EcoWI1ORF3131P
3132 Phage NinB DNA recombination
 
chromosome WI2
 
342 DamX, an inner membrane protein involved in bile
343 M M.SspPIBDamP (100% identity) GATC M.EcoWI2DamP
344 Ribulose-phosphate 3-epimerase
 
463 FIG00638667: hypothetical protein
464 M M.Ssp28760ORF20045P (100% identity) ATGCAT M.EcoWI2ORF464P
465 DNA-binding protein Fis
 
1817 metal-dependent phosphohydrolase
1818 M M.SspS13DcmP (100% identity) CCWGG M.EcoWI2DcmP
1819 V V.SsoSE61DcmP (100% identity) V.EcoWI2DcmP
1820 Permease of the drug/metabolite transporter
 
2502 conserved domain protein
2503 M M.Sen58011ORF9805P (100% identity) M.EcoWI2ORF2503P
2504 LygF
 
3132 Phage NinX
3133 M M.SflWW1ORF7070P (100% identity) GATC M.EcoWI2ORF3133P
3134 Phage NinB DNA recombination
 
plasmid NRZ14408_C
 
??? M M.EcosS1ORF18905P (100% identity) ATGCAT M.Eco14408ORFIP
 
??? M M.SspPIBORF6330P (99% identity) M.Eco14408ORFUP
 
??? M M.Ema777ORF13650P (93% identity) M.Eco14408ORFGP
 
??? M M.Ecos135DcmP (100% identity) CCWGG M.Eco14408DcmP
??? V V.SflFF64DcmP (100% identity) V.Eco14408DcmP
 
??? M M.EcoleORFAP (100% identity) M.Eco14408ORFFP
 
??? M M.Sen24760ORF10410P (98% identity) GATC M.Eco14408ORFEP
 
??? M M.Ecoi362ORF3506P (100% identity) M.Eco14408ORFCP
??? R Eco6C06ORF19785P (100% identity) Eco14408ORFCP
 
??? M M.EcoPK8275ORF4990P (100% identity) M.Eco14408ORFBP
 
plasmid p14408_1
 
??? M M.KpnKP148ORFAP (94% identity) M.Eco14408ORFLP
 
??? M M.Xca80ORFEP (100% identity) M.Eco14408ORFKP
 
plasmid p14408_2
 
??? M M.KpnKP148ORFAP (100% identity) CCWGG M.Eco14408ORFMP
??? R YpsR2ORFAP (100% identity) CCWGG Eco14408ORFMP
 
plasmid p14408_M1
 
??? M M.YpsF1ORFCP (100% identity) M.Eco14408ORFSP
 
??? M M.YpsF1ORFBP (100% identity) M.Eco14408ORFRP
 
??? M M.YpsF1ORFDP (100% identity) GATC M.Eco14408ORFPP
 
plasmid pO86A1
 
66 103 aa hypothetical protein
67 M M.EcoST05ORF1160P (100% identity) M.EcopO86ORFAP
68 73 aa hypothetical protein
 
plasmid pWI1-incFII
 
4819 103 aa conserved hypothetical protein
4820 M M.EcoWI2ORF4863P (100% identity) M.EcoWI1ORF4820P
4821 73 aa hypothetical protein
 
plasmid pWI1-incI1
 
4948 cytoplasmic protein
4949 M M.EcoWI2ORF4992P (100% identity) M.EcoWI1ORF4949P
4950 41 aa hypothetical protein
 
plasmid pWI1-KPC3
 
4803 insertion element protein InsB
4804 M M.KpnKP148ORFAP (100% identity) CCWGG M.EcoWI1ORF4804P
4805 R Sen23701ORF24490P (100% identity) CCWGG EcoWI1ORF4804P
4806 Resolvase
 
plasmid pWI2-incFII
 
4862 103 aa conserved hypothetical protein
4863 M M.EcoWI1ORF4820P (100% identity) M.EcoWI2ORF4863P
4864 73 aa hypothetical protein
 
plasmid pWI2-incI1
 
4991 cytoplasmic protein
4992 M M.EcoWI1ORF4949P (100% identity) M.EcoWI2ORF4992P
4993 41 aa hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
139 anti-adapter protein IraM
140 R SsoSE61ORF22640P (100% identity) YCGR Eco26R793ORFAP
141 resolvase, N-terminal domain protein
 
183 GTP-binding protein YjiA
185 R SenHNK130MrrP (100% identity) Eco26R793MrrP
186 type I restriction-modification system deoxyribonuclease
 
201 100 aa hypothetical protein Ec53638_1442
202 R Msa17McrB2P (100% identity) Eco26R793McrBP
203 R Msa17McrC2P (100% identity) Eco26R793McrCP
204 931 aa hypothetical protein
 
chromosome I
 
??? R Msa17McrC2P (100% identity) Eco101EMcrCP
??? R Msa17McrB2P (100% identity) Eco101EMcrBP
??? Type I restriction modification DNA specificity domain protein
 
??? Type I restriction enzyme EcoKI R protein
??? R SenHNK130MrrP (100% identity) Eco101EMrrP
 
chromosome I
 
??? R Msa17McrC2P (100% identity) Eco107EMcrCP
??? R Msa17McrB2P (100% identity) Eco107EMcrBP
??? Type I restriction modification DNA specificity domain protein
 
??? Type I restriction enzyme EcoKI R protein
??? R SenHNK130MrrP (100% identity) Eco107EMrrP
 
chromosome I
 
??? R Msa17McrC2P (100% identity) Eco102EMcrCP
??? R Msa17McrB2P (100% identity) Eco102EMcrBP
??? Type I restriction modification DNA specificity domain protein
 
??? Type I restriction enzyme EcoKI R protein
??? R EcoZK126MrrP (100% identity) Eco102EMrrP
??? Mrr restriction system protein
 
??? Mrr restriction system protein
??? R SenHNK130MrrP (100% identity) Eco102EMrr2P
 
chromosome I
 
??? R Msa17McrC2P (100% identity) Eco105EMcrCP
??? R Msa17McrB2P (100% identity) Eco105EMcrBP
??? Type I restriction modification DNA specificity domain protein
 
??? Type I restriction enzyme EcoKI R protein
??? R SenHNK130MrrP (100% identity) Eco105EMrrP
 
chromosome I
 
??? R Msa17McrC2P (100% identity) Eco109EMcrCP
??? R Msa17McrB2P (100% identity) Eco109EMcrBP
??? Type I restriction modification DNA specificity domain protein
 
??? Type I restriction enzyme EcoKI R protein
??? R EcoZK126MrrP (100% identity) Eco109EMrrP
??? Mrr restriction system protein
 
??? Mrr restriction system protein
??? R SenHNK130MrrP (100% identity) Eco109EMrr2P
 
chromosome I
 
??? R Msa17McrC2P (100% identity) Eco106EMcrCP
??? R Msa17McrB2P (100% identity) Eco106EMcrBP
??? Type I restriction modification DNA specificity domain protein
 
??? Type I restriction enzyme EcoKI R protein
??? R SenHNK130MrrP (100% identity) Eco106EMrrP
 
chromosome I
 
??? R Msa17McrC2P (100% identity) Eco103EMcrCP
??? R Msa17McrB2P (100% identity) Eco103EMcrBP
??? Type I restriction modification DNA specificity domain protein
 
??? Type I restriction enzyme EcoKI R protein
??? R SenHNK130MrrP (100% identity) Eco103EMrrP
 
chromosome I
 
??? R Msa17McrC2P (100% identity) Eco108EMcrCP
??? R Msa17McrB2P (100% identity) Eco108EMcrBP
??? Type I restriction modification DNA specificity domain protein
 
??? Type I restriction enzyme EcoKI R protein
??? R SenHNK130MrrP (100% identity) Eco108EMrrP
 
chromosome I
 
??? R Msa17McrC2P (100% identity) Eco104EMcrCP
??? R Msa17McrB2P (100% identity) Eco104EMcrBP
??? Type I restriction modification DNA specificity domain protein
 
??? Type I restriction enzyme EcoKI R protein
??? R SenHNK130MrrP (100% identity) Eco104EMrrP
 
chromosome WI1
 
3971 FIG00639818: hypothetical protein
3972 R SflSTLE4McrCP (100% identity) EcoWI1McrCP
3973 R SflSTLE4McrBP (100% identity) EcoWI1McrBP
3974 Z1226 protein
 
chromosome WI2
 
3968 FIG00639818: hypothetical protein
3969 R SflSTLE4McrCP (100% identity) EcoWI2McrCP
3970 R SflSTLE4McrBP (100% identity) EcoWI2McrBP
3971 Z1226 protein
Orphan M
ORF Gene Most similar Specificity Name
 
chromosome I
 
??? M Site-specific DNA-methyltransferase GATC M.Eco101EORFBP
 
chromosome I
 
??? M Site-specific DNA-methyltransferase GATC M.Eco107EORFBP
 
chromosome I
 
??? M Site-specific DNA-methyltransferase GATC M.Eco102EORFBP
 
chromosome I
 
??? M Site-specific DNA-methyltransferase GATC M.Eco105EORFBP
 
chromosome I
 
??? M Site-specific DNA-methyltransferase GATC M.Eco109EORFBP
 
chromosome I
 
??? M Site-specific DNA-methyltransferase GATC M.Eco106EORFBP
 
chromosome I
 
??? M Site-specific DNA-methyltransferase GATC M.Eco103EORFBP
 
chromosome I
 
??? M Site-specific DNA-methyltransferase GATC M.Eco108EORFBP
 
chromosome I
 
??? M Site-specific DNA-methyltransferase GATC M.Eco104EORFBP
 
chromosome phage_14408_1
 
??? M M.EcoSTEC346ORFJP (100% identity) GATC M.Eco14408ORFTP
 
plasmid NRZ14408_C
 
??? M M.Fnu048ORFTP (100% identity) GATC M.Eco14408ORFJP
 
??? M M.Eph43ORF57P (100% identity) GATC M.Eco14408ORFDP
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