Mannheimia varigena USDA-ARS-USMARC-1296 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Mannheimia varigena USDA-ARS-USMARC-1296 RM systems
Ref: Harhay,G.P. et al. unpublished
REBASE ref # 15213
Complete sequence: 2,245,238 bp
GenBank #: CP006943
REBASE acronym: Mva1296
Org_num: 11147
All begin X808_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10520 | 241 aa hypothetical protein | |||
| 10530 | R | Asu137ORF7910P (94% identity) | Mva1296ORF10520P | |
| 10540 | 1087 aa hypothetical protein | |||
| 10540 | 1087 aa hypothetical protein | |||
| 10550 | S | S.Bsu4016ORF3040P (48% identity) | GCGANNNNNNRTG | S1.Mva1296II |
| 10560 | M | M.Asu137ORF7910P (96% identity) | GCGANNNNNNRTG | M.Mva1296II |
| 10570 | DNA-damage-inducible protein D | |||
| 10580 | S | S1.Ami202ORF3085P (58% identity) | S2.Mva1296IIP | |
| 10590 | 42 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6170 | 3-dehydroquinate synthase | |||
| 6180 | M | M.MvaT1ORF5490P (100% identity) | GATC | M.Mva1296I |
| 6190 | sodium-dependent transporter | |||
| 8880 | DNA replication protein P | |||
| 8890 | M | M.Hpa1372ORF8240P (71% identity) | GATC | M.Mva1296ORF8890P |
| 8900 | 150 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10670 | Citrate synthase I | |||
| 10680 | R | Mva1312ORF9900P (99% identity) | Mva1296ORF10690P | |
| ??? | M | M.MvaF222ORF4345P (89% identity) | M.Mva1296ORF10690P | |
| 10710 | Trimethylamine-N-oxide reductase | |||