Mannheimia varigena USDA-ARS-USMARC-1261 |
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Putative Mannheimia varigena USDA-ARS-USMARC-1261 RM systems
Ref: Harhay,G.P. et al. unpublished
REBASE ref # 15213
Complete sequence: 2,393,449 bp
GenBank #: CP006942
REBASE acronym: Mva1261
Org_num: 11146
All begin X781_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7090 | HicB-related protein | |||
| 7100 | M | M.Mgr16803ORF2245P (98% identity) | CTANNNNNNRTTC | M.Mva1261III |
| 7110 | S | S.Api2044ORF14440P (37% identity) | CTANNNNNNRTTC | S.Mva1261III |
| 7120 | R | Mgr16803ORF2245P (98% identity) | CTANNNNNNRTTC | Mva1261III |
| 7130 | ABC transporter ATP-binding protein uup-1 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8230 | 210 aa hypothetical protein | |||
| 8240 | M | M.Ase15768ORF3775P (94% identity) | GATC | M.Mva1261ORF8250P |
| 8250 | Replication protein P | |||
| 16790 | sodium-dependent transporter | |||
| 16800 | M | M.Mbo11ORF10005P (99% identity) | GATC | M.Mva1261I |
| 16810 | 3-dehydroquinate synthase | |||
| 20380 | Anaerobic C4-dicarboxylate transporter | |||
| 20390 | M | M.Btr192IV (78% identity) | A | M.Mva1261ORF20400P |
| 20400 | Enoyl-CoA hydratase/carnithine racemase-like | |||
| 22000 | Glycyl-tRNA synthetase beta subunit | |||
| 22010 | M | M.AacAA1ORF2951P (72% identity) | GATATC | M.Mva1261II |
| 22020 | Type II site-specific deoxyribonuclease | |||
| 22010 | Modification methylase EcoRV | |||
| 22020 | R | AacAA1ORF2951P (82% identity) | GATATC | Mva1261ORF22040P |
| 22030 | Glutaredoxin-related protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2490 | NADPH dehydrogenase | |||
| 2500 | R | Msp190616ORF3705P (98% identity) | Mva1261ORF2510P | |
| 2510 | M | M.Nme8554ORF288P (48% identity) | M.Mva1261ORF2510P | |
| 2520 | LysR family transcriptional regulator | |||
| 12080 | 38 aa hypothetical protein | |||
| 12090 | M | M.Mgr113526ORF5820P (86% identity) | M.Mva1261ORF12100P | |
| 12100 | R | Mva1388ORF10830P (98% identity) | Mva1261ORF12100P | |
| 12110 | Citrate synthase I | |||