Serratia marcescens SM39 |
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Putative Serratia marcescens SM39 RM systems
Ref: Iguchi,A. et al. unpublished
REBASE ref # 16735
Complete sequence: 5,225,577 bp
GenBank #: AP013063
REBASE acronym: SmaSM39
Org_num: 12038
All begin SM39_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3745 | 72 aa hypothetical protein | |||
| 3746 | R | Sma2009ORF45570P (100% identity) | SmaSM39ORF3750P | |
| 3748 | S | S.Sma2009ORF45570P (100% identity) | S.SmaSM39ORF3750P | |
| 3749 | anticodon nuclease | |||
| 3750 | M | M.Sma2009ORF45570P (100% identity) | M.SmaSM39ORF3750P | |
| 3751 | 207 aa hypothetical protein | |||
| 4851 | IS3 family transposase | |||
| 4855 | R | SmaKC057ORF45710P (100% identity) | SmaSM39ORF4858P | |
| 4856 | 348 aa hypothetical protein | |||
| 4857 | S | S.SmaKC057ORF45710P (100% identity) | S.SmaSM39ORF4858P | |
| 4858 | M | M.SmaKC057ORF45710P (100% identity) | M.SmaSM39ORF4858P | |
| 4860 | transposase of IS3 family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 226 | 335 aa hypothetical protein | |||
| 227 | M | M.Sma2009ORF8210P (100% identity) | M.SmaSM39ORF227P | |
| 228 | 128 aa hypothetical protein | |||
| 516 | phage integrase | |||
| 517 | M | M.Sma2009ORF11090P (100% identity) | GATC | M.SmaSM39ORF517P |
| 518 | 62 aa hypothetical protein | |||
| 4052 | ribulose-phosphate 3-epimerase | |||
| 4053 | M | M.SspYD25DamP (100% identity) | GATC | M.SmaSM39DamP |
| 4054 | predicted protein | |||
| 4865 | 598 aa hypothetical protein | |||
| 4866 | R | SmaKC057ORF45780P (100% identity) | SmaSM39ORF4866P | |
| 4867 | 50 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2666 | protein involved in the negative regulation of | |||
| 2667 | M | M.Sma2009ORF33290P (100% identity) | M.SmaSM39ORF2667P | |
| 2668 | R | Sma2009ORF33290P (100% identity) | SmaSM39ORF2667P | |
| 2670 | pseudogene | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4873 | transposase of IS256 family | |||
| 4874 | R | SmaKC057ORF45820P (100% identity) | SmaSM39ORF4874P | |
| 4875 | 102 aa hypothetical protein | |||