Ruminococcus species 80/3 |
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Putative Ruminococcus species 80/3 RM systems
Ref: Wegmann,U. et al. unpublished
REBASE ref # 16974
| Sequence length: | GenBank #: | |
| chromosome I: | 2,240,877 bp | HF545616 |
| chromosome II: | 727,623 bp | HF545617 |
REBASE acronym: Rsp80
Org_num: 11995
All begin RBI_I, RBI_II
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 345 | Phage integrase | |||
| 346 | S | S3.Rsp80ORF350P (81% identity) | S1.Rsp80ORF350P | |
| ??? | R | PmeBin150ORFAP (100% identity) | Rsp80ORF350P | |
| 349 | S | S1.PmeBin371ORFCP (43% identity) | S2.Rsp80ORF350P | |
| 350 | M | M.PmeBin150ORFAAP (99% identity) | M.Rsp80ORF350AP | |
| 351 | M | M.PmeBin150ORFABP (93% identity) | M.Rsp80ORF350BP | |
| 352 | S | S1.PmeBin371ORFCP (45% identity) | S3.Rsp80ORF350P | |
| 353 | 245 aa hypothetical protein | |||
| 1524 | 371 aa hypothetical protein | |||
| 1525 | R | PmeBin150ORFEP (94% identity) | Rsp80ORF1526P | |
| 1526 | M | M.PmeBin150ORFEP (99% identity) | M.Rsp80ORF1526P | |
| 1527 | S | S1.PmeBin150ORFEP (46% identity) | S1.Rsp80ORF1526P | |
| 1528 | 267 aa hypothetical protein | |||
| 1529 | 233 aa hypothetical protein predicted by | |||
| 1530 | S | S2.PmeBin150ORFEP (62% identity) | S2.Rsp80ORF1526P | |
| 1531 | 313 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 262 | 90 aa hypothetical protein predicted by | |||
| 263 | M | M2.Rsp80ORF1241P (88% identity) | M.Rsp80ORF263P | |
| 264 | 65 aa hypothetical protein predicted by | |||
| 267 | 253 aa conserved hypothetical protein | |||
| 268 | M | M.Rsp80ORF604P (90% identity) | M.Rsp80ORF268P | |
| 269 | 101 aa hypothetical protein | |||
| 269 | 101 aa hypothetical protein | |||
| 270 | R | R1.Lba1585ORF2365P (52% identity) | R1.Rsp80ORF272P | |
| 271 | R | R2.Lba1585ORF2365P (60% identity) | R2.Rsp80ORF272P | |
| 272 | M | M.Lba1585ORF2365P (67% identity) | GASTC | M.Rsp80ORF272P |
| 274 | cytosine methyltransferase | |||
| 272 | DNA adenine methylase | |||
| 274 | M | M.Rsp80ORF268P (34% identity) | M.Rsp80ORF274P | |
| 275 | 88 aa hypothetical protein | |||
| 361 | 496 aa hypothetical protein | |||
| 362 | M | M.UbaFSORFEP (30% identity) | M.Rsp80ORF362P | |
| 363 | 235 aa hypothetical protein predicted by | |||
| 1240 | 108 aa hypothetical protein | |||
| 1241 | M | M.Rsp80ORF604P (95% identity) | M1.Rsp80ORF1241P | |
| 1242 | 258 aa hypothetical protein | |||
| 1243 | 133 aa hypothetical protein | |||
| 1244 | 46 aa hypothetical protein predicted by | |||
| 1245 | 66 aa hypothetical protein predicted by | |||
| 1246 | M | M.Rsp80ORF263P (88% identity) | M2.Rsp80ORF1241P | |
| 1247 | 90 aa hypothetical protein predicted by | |||
| 1500 | Transposase helper protein | |||
| ??? | R | CboFORF2133P (38% identity) | GCSGC | Rsp80ORF1504P |
| 1502 | 344 aa hypothetical protein | |||
| 1503 | 588 aa hypothetical protein | |||
| 1504 | M | M.RspA76ORFEP (90% identity) | GCWGC | M.Rsp80ORF1504P |
| 1505 | V | V.RspA76ORFEP (82% identity) | V.Rsp80ORF1504P | |
| 1506 | 548 aa hypothetical protein | |||
| 2000 | 684 aa hypothetical protein | |||
| 2001 | R | RspKB18ORF11865P (69% identity) | Rsp80ORF2002P | |
| 2002 | M | M.Aba761ORF1414P (54% identity) | M.Rsp80ORF2002P | |
| 2003 | 119 aa hypothetical protein | |||
| chromosome II | ||||
| 412 | 304 aa hypothetical protein | |||
| 413 | S | S.PmeBin150ORFDP (92% identity) | S.Rsp80ORF414P | |
| 414 | RM | PmeBin150ORFDP (99% identity) | Rsp80ORF414P | |
| 660 | sigma-70 region 2 | |||
| 518 | 63 aa hypothetical protein predicted by | |||
| 519 | M | M.Rsp57ORFAP (100% identity) | M.Rsp80ORF519P | |
| 520 | 75 aa hypothetical protein predicted by | |||
| 598 | 89 aa hypothetical protein predicted by | |||
| 599 | M | M.Rsp80ORF263P (89% identity) | M.Rsp80ORF599P | |
| 600 | 65 aa hypothetical protein predicted by | |||
| 603 | 257 aa hypothetical protein | |||
| 604 | M | M1.Rsp80ORF1241P (95% identity) | M.Rsp80ORF604P | |
| 605 | 87 aa hypothetical protein | |||