Serratia species ATCC 39006 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Serratia species ATCC 39006 RM systems
Ref: Fineran,P.C. et al. Genome Announc 1 (6), e01039-13 (2013)
REBASE ref # 16902
| Sequence length: | GenBank #: | |
| Chromosome: | 4,944,787 bp | AWXH00000000 (NZ_AWXH00000000) |
| Chromosome: | 4,971,757 bp | CP025084 |
REBASE acronym: Ssp39006
Org_num: 11187
All begin Ser39006_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 105 | 1095 aa hypothetical protein | |||
| 110 | M | M.Yps581ORF5460P (93% identity) | GGYAYNNNNGTC | M.Ssp39006I |
| 115 | S | S.PspCBS03ORF4725P (79% identity) | GGYAYNNNNGTC | S.Ssp39006I |
| 120 | DUF4268 domain-containing protein | |||
| 125 | R | Rba84756ORF13830P (95% identity) | GGYAYNNNNGTC | Ssp39006IP |
| 130 | nuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2604 | 229 aa hypothetical protein | |||
| 2605 | M | M.Ssp39006ORF7770P (100% identity) | M2.Ssp39006ORF2606P | |
| 2606 | M | M.Ssp39006ORF14345P (100% identity) | M1.Ssp39006ORF2606P | |
| 2607 | 82 aa hypothetical protein | |||
| 4171 | 79 aa hypothetical protein | |||
| 4172 | M | M.Ssp39006ORF7800P (100% identity) | M.Ssp39006ORF4173P | |
| 4173 | 231 aa hypothetical protein | |||
| 4177 | 82 aa hypothetical protein | |||
| 4178 | M | M.Ssp39006ORF7775P (100% identity) | M1.Ssp39006ORF4179P | |
| 4179 | M | M.Ssp39006ORF7770P (100% identity) | M2.Ssp39006ORF4179P | |
| 4180 | 229 aa hypothetical protein | |||
| Chromosome | ||||
| 555 | ribulose-phosphate 3-epimerase | |||
| 560 | M | M.PbaCE90DamP (100% identity) | M.Ssp39006DamP | |
| 565 | SPOR domain-containing protein | |||
| 7765 | 229 aa hypothetical protein | |||
| 7770 | M | M2.Ssp39006ORF4179P (100% identity) | M.Ssp39006ORF7770P | |
| 7775 | DNA cytosine methyltransferase | |||
| 7770 | class I SAM-dependent methyltransferase | |||
| 7775 | M | M1.Ssp39006ORF4179P (100% identity) | M.Ssp39006ORF7775P | |
| 7780 | 82 aa hypothetical protein | |||
| 7795 | antiterminator | |||
| 7800 | M | M.Ssp39006ORF4173P (100% identity) | M.Ssp39006ORF7800P | |
| 7805 | lysis protein | |||
| 14340 | 82 aa hypothetical protein | |||
| 14345 | M | M1.Ssp39006ORF2606P (100% identity) | M.Ssp39006ORF14345P | |
| 14350 | class I SAM-dependent methyltransferase | |||
| 14345 | DNA cytosine methyltransferase | |||
| 14350 | M | M.Ssp39006ORF7770P (100% identity) | M.Ssp39006ORF14350P | |
| 14355 | 229 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21775 | HD domain-containing protein | |||
| 21780 | R | PbaC52MrrP (99% identity) | Ssp39006Mrr2P | |
| 21785 | aminomethyl-transferring glycine dehydrogenase | |||