Ralstonia solanacearum SD54 |
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Putative Ralstonia solanacearum SD54 RM systems
Ref: Shan,W. et al. Genome Announc 1 (6), e00890-13 (2013)
REBASE ref # 16895
Contig set: 5,647,316 bp
GenBank #: ASQR00000000 (NZ_ASQR00000000)
REBASE acronym: Rso44
Org_num: 11914
All begin L665_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3852 | sensor histidine kinase | |||
| 3853 | R | RsoYQORF285P (100% identity) | Rso44ORF3855P | |
| 3854 | transmembrane protein | |||
| 3855 | M | M.RsoYQORF285P (100% identity) | M.Rso44ORF3855P | |
| 3856 | 172 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 639 | M | M.RsoYQORF1280P (100% identity) | M.Rso44ORF639P | |
| 640 | bacteriophage-related transmembrane protein | |||
| 7 | ATPase | |||
| ??? | M | M.RsoT60ORF25P (100% identity) | M.Rso44ORFAP | |
| 8 | DNA gyrase subunit B | |||
| 1712 | 135 aa hypothetical protein | |||
| 1713 | M | M2.Rso211472ORF26760P (100% identity) | M1.Rso44ORF1713P | |
| 1714 | M | M2.RsoUW763ORF6925P (100% identity) | M2.Rso44ORF1713P | |
| 1715 | 121 aa hypothetical protein | |||
| 1816 | tryptophan synthase subunit alpha | |||
| 1817 | M | M.Rsp647ORF10140P (100% identity) | M.Rso44ORF1817P | |
| 1818 | tryptophan synthase subunit beta | |||
| 1106 | 374 aa hypothetical protein | |||
| 1107 | M | M.RsoT78ORF1950P (100% identity) | M.Rso44ORF1107P | |
| 1108 | 38 aa hypothetical protein | |||
| 4608 | 99 aa hypothetical protein | |||
| ??? | M | site-specific DNA-methyltransferase | M1.Rso44ORF4609P | |
| 4610 | M | M2.RsoYC40ORF234P (100% identity) | M2.Rso44ORF4609P | |
| 4611 | 121 aa hypothetical protein | |||
| 4077 | type III restriction-modification | |||
| ??? | M | M.Rso644ORFHP (100% identity) | GATC | M.Rso44ORFBP |
| 4078 | 527 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4076 | Phage integrase family protein | |||
| 4077 | M | M.Rso644ORFCP (82% identity) | M.Rso44ORF4077P | |
| ??? | DNA adenine methylase | |||