Thermosynechococcus species NK55 |
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Putative Thermosynechococcus species NK55 RM systems
Ref: Stolyar,S. et al. unpublished
REBASE ref # 17250
Complete sequence: 2,520,064 bp
GenBank #: CP006735
REBASE acronym: TspNK55
Org_num: 11588
All begin NK55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2090 | hypothetical protein | |||
| 2095 | R | UacJFFORF24P (12% identity) | TspNK55ORF2100P | |
| 2100 | M | type I restriction-modification system | M.TspNK55ORF2100P | |
| 2105 | primary replicative DNA helicase DnaB | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3715 | pseudogene | |||
| 3720 | RM | M2.TspPP555ORF2855P (81% identity) | TspNK55ORF3720AP | |
| 3725 | protein of unknown function DUF511 | |||
| 3735 | RM | Rca13941ORF2226P (93% identity) | TspNK55ORF3720BP | |
| 3730 | deoxyribonuclease YcfH | |||
| 4525 | integral membrane protein associated with | |||
| 4530 | M | M.TelBORF1578P (93% identity) | GATC | M.TspNK55ORF4530P |
| 4535 | 284 aa hypothetical protein | |||
| 6055 | protein of unknown function DUF1257 | |||
| 6060 | M | M.TspTG218ORF10175P (94% identity) | RGATCY | M.TspNK55ORF6060P |
| 6070 | NUDIX family hydrolase | |||
| 6415 | 230 aa hypothetical protein | |||
| 6420 | M | M.Tvu2134ORF23810P (94% identity) | M.TspNK55ORF6420P | |
| 6425 | 185 aa hypothetical protein | |||
| 9130 | toxin-antitoxin system toxin component VapC | |||
| 9135 | M | M.UgaJFFORF18P (72% identity) | M.TspNK55ORF9135P | |
| 9140 | protein of unknown function DUF433 | |||
| 10100 | DNA/RNA helicases SNF2 family | |||
| 10105 | RM | CspsDORF945P (42% identity) | TspNK55ORF10105P | |
| 10110 | proton-translocating NADH-quinone dehydrogenase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6080 | inorganic pyrophosphatase Ppa | |||
| 6090 | R | Hri593ORF22090P (88% identity) | TspNK55ORF6110P | |
| 6095 | 134 aa hypothetical protein | |||
| 6100 | 123 aa hypothetical protein | |||
| 6105 | 256 aa hypothetical protein | |||
| 6110 | M | M.TspWL17ORF1045BP (42% identity) | M.TspNK55ORF6110P | |
| 6120 | intramembrane C-terminal tripeptide | |||
| 11325 | helicase (Snf2/Rad54 family) | |||
| 11330 | M | M.Pba10988ORF3150P (42% identity) | M.TspNK55ORF11325P | |
| 11335 | protein of unknown function TIGR02436 | |||
| 11340 | R | UbaMSORFV17P (21% identity) | TspNK55ORF11325P | |
| 11345 | transcription-repair coupling factor Mfd | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11315 | dTDP-6-deoxy-L-mannose-dehydrogenase RfbD | |||
| 11320 | R | NspENR4MrrP (60% identity) | TspNK55MrrP | |
| 11325 | helicase (Snf2/Rad54 family) | |||