Haemophilus parasuis 84-15995 |
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Putative Haemophilus parasuis 84-15995 RM systems
Ref: Kuehn,J.S. et al. Genome Announc 1 (5), e00739-13 (2013)
REBASE ref # 16660
Contig set: 2,090,833 bp
GenBank #: APBX00000000 (NZ_APBX00000000)
REBASE acronym: Hpa15995
Org_num: 11493
All begin HPS8415995_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1624 | methyltransferase GidB | |||
| 1625 | M | M.HpaST41ORF7145P (100% identity) | M.Hpa15995ORF1625P | |
| 1626 | 163 aa hypothetical protein | |||
| 1627 | 392 aa hypothetical protein | |||
| 1628 | R | GpaXP11ORF8450P (99% identity) | Hpa15995ORF1625P | |
| 1629 | specificity determinant for hsdM and hsdR | |||
| 1729 | naphthoate synthase domain protein | |||
| 1730 | M | M.HpaSW114ORF1565P (99% identity) | M.Hpa15995ORF1730P | |
| 1731 | anticodon nuclease PrrC | |||
| 1732 | anticodon nuclease | |||
| 1733 | S | S.HpaSW114ORF1565P (37% identity) | S1.Hpa15995ORF1730P | |
| 1734 | S | S.Hpa318ORF8280P (52% identity) | S2.Hpa15995ORF1730P | |
| 1735 | 255 aa hypothetical protein | |||
| 1736 | 145 aa hypothetical protein | |||
| 1737 | R | HpaST41ORF7300P (99% identity) | Hpa15995ORF1730P | |
| 1738 | 71 aa hypothetical protein | |||
| 451 | phosphoserine aminotransferase | |||
| 452 | M | M.HpaNagORF319P (99% identity) | M.Hpa15995ORF452P | |
| 453 | type I restriction modification DNA specificity | |||
| 454 | R | Hpa29755ORF346P (99% identity) | Hpa15995ORF452P | |
| 455 | histidinol-phosphate aminotransferase | |||
| 789 | 48 aa hypothetical protein | |||
| 790 | M | M.HpaNagORF693P (100% identity) | M.Hpa15995ORF790P | |
| 791 | S | S.GpaHPS1ORF7480P (99% identity) | S.Hpa15995ORF790P | |
| 792 | R | GpaHPS1ORF7480P (98% identity) | Hpa15995ORF790P | |
| 793 | apolipoprotein N-acyltransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 981 | aspartate-semialdehyde dehydrogenase | |||
| 982 | M | HpaNagORF863P (83% identity) | M.Hpa15995ORF982P | |
| 983 | transposase | |||
| 2057 | D-lactate dehydrogenase, NAD-dependent | |||
| 2058 | R | HpaST41ORF8905P (100% identity) | CGCG | Hpa15995ORF2059P |
| 2059 | M | M.HpaST41ORF8905P (100% identity) | CGCG | M.Hpa15995ORF2059P |
| 2060 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate | |||
| 1414 | transposase | |||
| 1415 | M | M.Hpa33ORF8359P (100% identity) | M.Hpa15995ORF1415P | |
| 1416 | adenine-specific DNA methylase containing a | |||
| 377 | chromosome partition protein mukE | |||
| 378 | M | M.HpaSHORF261P (88% identity) | CCGG | M.Hpa15995ORF378P |
| 379 | 175 aa hypothetical protein | |||
| 1795 | membrane protein | |||
| 1796 | M | 143 aa hypothetical protein | BA | M.Hpa15995ORF1796P |
| 1797 | 86 aa hypothetical protein | |||
| 2223 | neurotransmitter symporter family protein | |||
| 2224 | M | M.HpaSHDamP (100% identity) | GATC | M.Hpa15995ORF2224P |
| 2225 | 3-dehydroquinate synthase | |||
| 224 | 101 aa hypothetical protein | |||
| 225 | RM | Hpa906ORF11765P (99% identity) | Hpa15995ORF225P | |
| 226 | S | S.HpaSHORF1761P (98% identity) | S1.Hpa15995ORF225P | |
| 227 | S | S.HpaSH03ORF10290P (31% identity) | S2.Hpa15995ORF225P | |
| 228 | glutamate-1-semialdehyde 2,1-aminomutase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2248 | 50 aa hypothetical protein | |||
| 2249 | M | M.HpaST41ORF1100P (100% identity) | M.Hpa15995ORF2249P | |
| 2250 | R | HpaST41ORF1100P (100% identity) | Hpa15995ORF2249P | |
| 2251 | transposase | |||
| 1372 | 326 aa hypothetical protein | |||
| 1373 | R | Gpa1818ORF3335P (99% identity) | Hpa15995ORF1371P | |
| 1374 | M | M1.Hpa29755ORF875P (96% identity) | M1.Hpa15995ORF1371P | |
| 1375 | M | M.HpaSH03ORF10740P (41% identity) | M2.Hpa15995ORF1371P | |
| 1376 | ketol-acid reductoisomerase | |||