Lactobacillus fermentum MTCC 8711 |
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Putative Lactobacillus fermentum MTCC 8711 RM systems
Ref: Jayashree,S. et al. Genome Announc 1 (5), e00770-13 (2013)
REBASE ref # 16647
Contig set: 2,566,297 bp
GenBank #: AVAB00000000 (NZ_AVAB00000000)
REBASE acronym: Lfe8711
Org_num: 11553
All begin N219_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12825 | 140 aa hypothetical protein | |||
| ??? | S | S.LrhLcORF36P (100% identity) | S.Lfe8711ORF12835P | |
| 12835 | M | M.LrhLcORF36P (100% identity) | M.Lfe8711ORF12835P | |
| 12840 | R | LrhVSI43ORF14060P (100% identity) | Lfe8711ORF12835P | |
| 12845 | pseudogene | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11455 | M | M.Lfeike38ORF8300P (27% identity) | M.Lfe8711ORF11455P | |
| 11460 | 288 aa hypothetical protein | |||
| 12235 | M | M.Lfeike38ORF8300P (44% identity) | M.Lfe8711ORF12235P | |
| 12240 | 119 aa hypothetical protein | |||
| 13095 | uracil phosphoribosyltransferase | |||
| 13100 | RM | LcaJB16ORF8606P (100% identity) | Lfe8711ORF13100P | |
| 13105 | M | M.LcaJB16ORF8606P (100% identity) | M.Lfe8711ORF13100P | |
| 13110 | S | S.LcaJB16ORF8606P (100% identity) | S.Lfe8711ORF13100P | |
| 13115 | 121 aa hypothetical protein | |||
| 12555 | 81 aa hypothetical protein | |||
| 12560 | RM | Lre5007ORF1923P (100% identity) | Lfe8711ORF12560P | |
| 12565 | 129 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11295 | R | XorYNCXORF23860P (46% identity) | Lfe8711ORFAP | |
| ??? | M | M.XorYNCXORF23860P (17% identity) | M.Lfe8711ORFAP | |
| 6340 | 226 aa hypothetical protein | |||
| 6345 | R | LfeAORF1043P (100% identity) | Lfe8711ORF6350P | |
| ??? | M | M.LfeAORF1043P (100% identity) | M.Lfe8711ORF6350P | |
| 6355 | integrase | |||