Mannheimia haemolytica D193 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Mannheimia haemolytica D193 RM systems
Ref: Hauglund,M.J. et al. Genome Announc 1 (5), e00848-13 (2013)
REBASE ref # 16595
Contig set: 2,680,535 bp
GenBank #: ATSY00000000 (NZ_ATSY00000000)
REBASE acronym: MhaD193
Org_num: 11525
All begin L277_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.MhaH23ORF2958P (100% identity) | GAANNNNNGTC | M.MhaD193ORF12340P |
| 12345 | S | S.PhaAI (100% identity) | GACNNNNNTTC | S.MhaD193ORF12340P |
| 12350 | R | Mhas183ORF4955P (100% identity) | GAANNNNNGTC | MhaD193ORF12340P |
| 12355 | glutamine-synthetase adenylyltransferase | |||
| 6125 | phosphatidylserine decarboxylase | |||
| 6130 | R | Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNRTTG | MhaD193ORF6135P |
| 6135 | M | M.Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNRTTG | M.MhaD193ORF6135P |
| 6140 | transcriptional regulator | |||
| 6145 | 55 aa hypothetical protein | |||
| ??? | S | S1.MhaPORFGP (100% identity) | GNGAYNNNNNNNRTTG | S1.MhaD193ORF6135P |
| 6155 | integrase | |||
| ??? | S | S2.MhaH23ORF152P (100% identity) | S2.MhaD193ORF6135P | |
| 6165 | glutamate--cysteine ligase | |||
| 3110 | B12-dependent methionine synthase | |||
| 3115 | M | M.Pba12565ORF10250P (100% identity) | CAACNNNNNTC | M.MhaD193ORF3115P |
| ??? | S | S.MhaD174ORF11275P (100% identity) | CAACNNNNNTC | S.MhaD193ORF3115P |
| 3130 | 211 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11080 | 91 aa hypothetical protein | |||
| 11085 | M | M.Pba12565ORF6600P (100% identity) | M1.MhaD193ORF11085P | |
| 11090 | M | M.Pba12565ORF6605P (100% identity) | BA | M2.MhaD193ORF11085P |
| 11095 | 41 aa hypothetical protein | |||
| 13770 | DNA helicase | |||
| 13775 | M | M.Pba12565ORF7080P (100% identity) | GATC | M.MhaD193ORF13775P |
| 13780 | 168 aa hypothetical protein | |||
| 12960 | 61 aa hypothetical protein | |||
| 12965 | M | M.Pba12565ORF8745P (100% identity) | GCATC | M.MhaD193ORF12965P |
| 12970 | R | Pba12565ORF8745P (100% identity) | GCATC | MhaD193ORF12965P |
| 12975 | 101 aa hypothetical protein | |||
| 13400 | 348 aa hypothetical protein | |||
| 13405 | M | M.Pba12565ORF4290P (100% identity) | GATC | M.MhaD193ORF13405P |
| 13410 | 41 aa hypothetical protein | |||
| 11225 | 211 aa hypothetical protein | |||
| 11230 | M | M.Pba12565ORF4970P (100% identity) | GATC | M.MhaD193ORF11230P |
| 11240 | 342 aa hypothetical protein | |||
| 3000 | 52 aa hypothetical protein | |||
| 3005 | M | M.Pba12565ORF10370P (100% identity) | BA | M.MhaD193ORF3005P |
| 3010 | 812 aa hypothetical protein | |||
| 1120 | 3-dehydroquinate synthase | |||
| 1125 | M | M.Pba12565ORF3610P (100% identity) | GATC | M.MhaD193ORF1125P |
| 1130 | transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11975 | type II citrate synthase | |||
| ??? | R | Pba12565ORF5515P (100% identity) | CTGGAG | MhaD193ORFAP |
| ??? | M | M.MhaPORFJP (100% identity) | CTGGAG | M.MhaD193ORFAP |
| 11990 | trimethylamine N-oxide reductase I catalytic | |||