Vibrio nigripulchritudo SFn1 |
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Putative Vibrio nigripulchritudo SFn1 RM systems
Ref: Goudenege,D. et al. ISME J 7 (10), 1985-1996 (2013)
REBASE ref # 16624
| Sequence length: | GenBank #: | |
| Chromosome: | 2,212,415 bp | FO203527 |
| Chromosome: | 4,109,740 bp | FO203526 |
REBASE acronym: VniSFn1
Org_num: 11362
All begin VIBNI_A, VIBNI_B
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2016 | 418 aa hypothetical protein | |||
| 2017 | R | VniSFn1ORF3443P (99% identity) | VniSFn1ORF2017P | |
| 2018 | Restriction endonuclease | |||
| 2019 | 563 aa conserved hypothetical protein | |||
| 2020 | S | S.VniSFn1ORF3443P (100% identity) | S.VniSFn1ORF2017P | |
| 2021 | M | M.VniSFn1ORF3443P (100% identity) | M.VniSFn1ORF2017P | |
| 2022 | 525 aa conserved hypothetical protein | |||
| 3438 | 418 aa hypothetical protein | |||
| 3439 | R | VniSFn1ORF2017P (99% identity) | VniSFn1ORF3443P | |
| 3440 | Restriction endonuclease | |||
| 3441 | 563 aa conserved hypothetical protein | |||
| 3442 | S | S.VniSFn1ORF2017P (100% identity) | S.VniSFn1ORF3443P | |
| 3443 | M | M.VniSFn1ORF2017P (100% identity) | M.VniSFn1ORF3443P | |
| 3444 | 525 aa conserved hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1059 | 241 aa conserved hypothetical protein | |||
| 1060 | M | M.PanA103ORF20180P (79% identity) | RGCGCY | M.VniSFn1ORF1060P |
| 1061 | 117 aa hypothetical protein | |||
| Chromosome | ||||
| 866 | NUDIX hydrolase | |||
| 868 | M | M.Maz20414ORF8100P (66% identity) | M.VniSFn1ORF868P | |
| 869 | nucleoside triphosphate hydrolase | |||
| 2975 | 271 aa conserved hypothetical protein | |||
| 2976 | M | M.VniTUMORF4680P (99% identity) | GGCC | M.VniSFn1ORF2976P |
| 2977 | Protein pmbA | |||
| 3576 | Ribulose-phosphate 3-epimerase | |||
| 3577 | M | M.Vninig3DamP (100% identity) | GATC | M.VniSFn1DamP |
| 3578 | 507 aa conserved hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1961 | DNA helicase, UvrD/REP type | |||
| 1962 | M | M.VniSFn1ORF345P (100% identity) | M.VniSFn1ORF1962P | |
| 1963 | R | VniSFn1ORF345P (100% identity) | VniSFn1ORF1962P | |
| 1964 | 162 aa Conserved hypothetical protein | |||
| Chromosome | ||||
| 343 | 162 aa Conserved hypothetical protein | |||
| 344 | R | VniSFn1ORF1962P (100% identity) | VniSFn1ORF345P | |
| 345 | M | M.VniSFn1ORF1962P (100% identity) | M.VniSFn1ORF345P | |
| 346 | DNA helicase, UvrD/REP type | |||