Salmonella enterica subsp. enterica serovar Thompson RM6836 |
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Putative Salmonella enterica subsp. enterica serovar Thompson RM6836 RM systems
Ref: Parker,C.T. and Huynh,S. unpublished
REBASE ref # 16779
Complete sequence: 4,707,648 bp
GenBank #: CP006717
REBASE acronym: Sen6836
Org_num: 11353
All begin IA1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22100 | endoribonuclease SymE | |||
| 22105 | S | S.Spy5740I (100% identity) | AGANNNNNNNNCTGG | S.Sen6836ORF22110P |
| 22110 | M | M.Spy5740I (100% identity) | AGANNNNNNNNCTGG | M.Sen6836ORF22110P |
| 22115 | R | Spy5740IP (100% identity) | AGANNNNNNNNCTGG | Sen6836ORF22110P |
| 22120 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9880 | multidrug transporter | |||
| 9885 | V | V.StyUK1DcmP (100% identity) | V.Sen6836DcmP | |
| 9890 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.Sen6836DcmP |
| 9895 | hydrolase | |||
| 16410 | Fis family transcriptional regulator | |||
| 16415 | M | M.SenThORF2290P (100% identity) | ATGCAT | M.Sen6836ORF16415P |
| 16420 | 54 aa hypothetical protein | |||
| 16890 | ribulose-phosphate 3-epimerase | |||
| 16895 | M | M.StyTDamP (100% identity) | GATC | M.Sen6836DamP |
| 16900 | cell division protein DamX | |||
| 21955 | 202 aa hypothetical protein | |||
| 21960 | M | M.Spy5740IV (100% identity) | GGTACC | M.Sen6836ORF21960P |
| 21965 | R | Spy5740IVP (100% identity) | GGTACC | Sen6836ORF21960P |
| 21970 | 239 aa hypothetical protein | |||
| 21970 | 239 aa hypothetical protein | |||
| 21975 | R | SensS639ORF19755P (100% identity) | Sen6836ORF21975P | |
| 21980 | 241 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1925 | sugar transporter | |||
| 1930 | M | M.Spy5740II (100% identity) | CAGAG | M.Sen6836ORF1930P |
| ??? | R | Ssp15303ORFGP (99% identity) | CAGAG | Sen6836ORF1930P |
| 1940 | cytochrome D ubiquinol oxidase subunit I | |||