Phytoplasma species OY-M (onion yellows) |
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Putative Phytoplasma species OY-M (onion yellows) RM systems
Ref: Oshima,K. et al. Nat. Genet. 36 (1), 27-29 (2004)
REBASE ref # 8371
Complete sequence: 853,092 bp
GenBank #: AP006628 (NC_005303)
REBASE acronym: PhsOY
Org_num: 3838
All begin PAM_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 617 | DNA polymerase III, gamma/tau subunit | |||
| ??? | R | 631 aa hypothetical protein | PhsOYORF619P | |
| ??? | M | M.PstLD1ORF2640P (89% identity) | M.PhsOYORF619P | |
| ??? | S | S.PwiZORF1895P (65% identity) | S.PhsOYORF619P | |
| 620 | glutamyl- and glutaminyl-tRNA synthetase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 41 | single-stranded DNA-binding protein | |||
| 42 | M | M.PhsOYORF395P (95% identity) | GATC | M.PhsOYORF42P |
| 43 | bacterial nucleoid DNA-binding protein | |||
| 317 | bacterial nucleoid DNA-binding protein | |||
| ??? | M | M.PhsOYORF358P (99% identity) | GATC | M.PhsOYORF318P |
| 319 | single-stranded DNA-binding protein | |||
| 357 | bacterial nucleoid DNA-binding protein | |||
| ??? | M | M.PhsOYORF318P (99% identity) | GATC | M.PhsOYORF358P |
| 359 | single-stranded DNA-binding protein | |||
| 394 | bacterial nucleoid DNA-binding protein | |||
| 395 | M | M.PhsOYORF42P (95% identity) | M.PhsOYORF395P | |
| 396 | single-stranded DNA-binding protein | |||
| 397 | 131 aa hypothetical protein | |||
| 398 | M | M.PasOYVORF5710P (70% identity) | M.PhsOYORF398P | |
| 399 | 138 aa hypothetical protein | |||
| 408 | DNA-directed RNA polymerase sigma subunit | |||
| 409 | M | M.PhsOYORF565P (99% identity) | GATC | M.PhsOYORF409P |
| 410 | single-stranded DNA-binding protein | |||
| 564 | single-stranded DNA-binding protein | |||
| 565 | M | M.PhsOYORF409P (99% identity) | GATC | M.PhsOYORF565P |
| 566 | 78 aa hypothetical protein | |||