Desulfovibrio gigas DSM 1382 |
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Putative Desulfovibrio gigas DSM 1382 RM systems
Ref: Morais-Silva,F.O. et al. J. Bacteriol. (2013) In press
REBASE ref # 16576
Complete sequence: 3,693,999 bp
GenBank #: CP006585
REBASE acronym: Dgi1382
Org_num: 11348
All begin DGI_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1295 | 64 aa hypothetical protein | |||
| 1296 | M | M.Ppo17875ORF2648P (48% identity) | M.Dgi1382ORF1296P | |
| 1297 | CiaB protein | |||
| 1298 | death-on-curing family protein | |||
| 1299 | S | S.SroKRV36ORF12405P (45% identity) | S.Dgi1382ORF1296P | |
| 1300 | ATPase, AAA_4 family | |||
| 1301 | R | OspC33ORF5205P (65% identity) | Dgi1382ORF1296P | |
| 1302 | 152 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 302 | cell division protein FtsH | |||
| 304 | M | M.RsoF8ORF1445P (64% identity) | RGATCY | M.Dgi1382ORF304P |
| 305 | R | AthCLSTORFMP (33% identity) | GATC | Dgi1382ORF304P |
| 306 | 457 aa hypothetical protein | |||
| 475 | nucleotidyltransferase/DNA polymerase | |||
| 476 | V | V.BjaJ5ORF27065P (49% identity) | V.Dgi1382ORF478P | |
| 477 | 413 aa hypothetical protein | |||
| 478 | M | M.MspFAM1ORFAP (67% identity) | ACCGGT | M.Dgi1382ORF478P |
| 479 | ATPase | |||
| 932 | 353 aa hypothetical protein | |||
| 933 | V | V.Dsp106783ORF14550P (60% identity) | V.Dgi1382ORF935P | |
| 934 | R | DovB2TORF73850P (71% identity) | GGCGCC | Dgi1382ORF935P |
| 935 | M | M.UbaQ1ORF2234P (65% identity) | GGCGCC | M.Dgi1382ORF935P |
| 936 | protein of unknown function DUF847 | |||
| 968 | 112 aa hypothetical protein | |||
| 969 | M | M.Dma170ORFAP (71% identity) | M.Dgi1382ORF969P | |
| 970 | 132 aa hypothetical protein | |||
| 1280 | Nitrogenase reductase | |||
| 1281 | M | M.VbaB154ORF4030P (36% identity) | CAGCTG | M.Dgi1382ORF1281P |
| 1282 | 156 aa hypothetical protein | |||
| 2019 | 152 aa hypothetical protein | |||
| 2020 | M | M.AmuB1ORF8965P (48% identity) | CCGG | M.Dgi1382ORF2020P |
| 2021 | 979 aa hypothetical protein | |||
| 2025 | integrase catalytic subunit | |||
| 2026 | V | V.DfrJJORF170P (54% identity) | V.Dgi1382ORF2028P | |
| 2027 | 372 aa hypothetical protein | |||
| 2028 | M | M.DfrJJORF170P (76% identity) | ACCGGT | M.Dgi1382ORF2028P |
| 2029 | 262 aa hypothetical protein | |||
| 2360 | 158 aa hypothetical protein | |||
| 2361 | M | M.Ppr5001ORF3633P (54% identity) | M.Dgi1382ORF2361P | |
| 2362 | HesB-like domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2186 | multi-sensor signal transduction | |||
| 2187 | R | Asp3576ORF12720P (37% identity) | Dgi1382MrrP | |
| 2188 | type I glyceraldehyde-3-phosphate | |||